Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.08■□□□□ 0.81
CBX1P83916 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CBX1P83916 MIR6722-201ENST00000617286 78 ntBASIC20.08■□□□□ 0.81
CBX1P83916 AC074183.2-201ENST00000623112 922 ntBASIC20.08■□□□□ 0.81
CBX1P83916 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CBX1P83916 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CBX1P83916 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.08■□□□□ 0.8
CBX1P83916 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CBX1P83916 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CBX1P83916 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.07■□□□□ 0.8
CBX1P83916 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CBX1P83916 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX1P83916 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CBX1P83916 TEX21P-204ENST00000641479 1693 ntBASIC20.07■□□□□ 0.8
CBX1P83916 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CBX1P83916 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX1P83916 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX1P83916 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX1P83916 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX1P83916 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX1P83916 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX1P83916 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CBX1P83916 AC008741.2-201ENST00000612792 3115 ntBASIC20.06■□□□□ 0.8
CBX1P83916 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CBX1P83916 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.06■□□□□ 0.8
CBX1P83916 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.06■□□□□ 0.8
CBX1P83916 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.06■□□□□ 0.8
CBX1P83916 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CBX1P83916 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 AC141586.3-201ENST00000562166 1838 ntBASIC20.06■□□□□ 0.8
CBX1P83916 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.06■□□□□ 0.8
CBX1P83916 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CBX1P83916 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBX1P83916 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.05■□□□□ 0.8
CBX1P83916 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.05■□□□□ 0.8
CBX1P83916 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.05■□□□□ 0.8
CBX1P83916 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CBX1P83916 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CBX1P83916 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CBX1P83916 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.05■□□□□ 0.8
CBX1P83916 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.05■□□□□ 0.8
CBX1P83916 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.05■□□□□ 0.8
CBX1P83916 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.05■□□□□ 0.8
CBX1P83916 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBX1P83916 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.05■□□□□ 0.8
CBX1P83916 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.04■□□□□ 0.8
CBX1P83916 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CBX1P83916 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.04■□□□□ 0.8
CBX1P83916 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CBX1P83916 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.04■□□□□ 0.8
CBX1P83916 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CBX1P83916 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.04■□□□□ 0.8
CBX1P83916 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.04■□□□□ 0.8
CBX1P83916 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBX1P83916 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms