Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS3AP61247 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RPS3AP61247 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RPS3AP61247 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS3AP61247 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RPS3AP61247 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.91■□□□□ 0.46
RPS3AP61247 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RPS3AP61247 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPS3AP61247 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
RPS3AP61247 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RPS3AP61247 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 RPS2P52-201ENST00000469610 820 ntBASIC17.91■□□□□ 0.46
RPS3AP61247 AC142381.4-202ENST00000563973 229 ntBASIC17.91■□□□□ 0.46
RPS3AP61247 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.91■□□□□ 0.46
RPS3AP61247 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.91■□□□□ 0.46
RPS3AP61247 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RPS3AP61247 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.91■□□□□ 0.46
RPS3AP61247 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
RPS3AP61247 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPS3AP61247 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RPS3AP61247 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.91■□□□□ 0.46
RPS3AP61247 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RPS3AP61247 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RPS3AP61247 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS3AP61247 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.9■□□□□ 0.46
RPS3AP61247 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RPS3AP61247 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.9■□□□□ 0.46
RPS3AP61247 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS3AP61247 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RPS3AP61247 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.9■□□□□ 0.46
RPS3AP61247 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.9■□□□□ 0.46
RPS3AP61247 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.9■□□□□ 0.46
RPS3AP61247 AL121906.2-201ENST00000621597 723 ntBASIC17.9■□□□□ 0.46
RPS3AP61247 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.9■□□□□ 0.46
RPS3AP61247 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.9■□□□□ 0.46
RPS3AP61247 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPS3AP61247 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPS3AP61247 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPS3AP61247 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RPS3AP61247 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.89■□□□□ 0.46
RPS3AP61247 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.89■□□□□ 0.46
RPS3AP61247 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS3AP61247 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.89■□□□□ 0.45
RPS3AP61247 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS3AP61247 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS3AP61247 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS3AP61247 RN7SL471P-201ENST00000580476 299 ntBASIC17.89■□□□□ 0.45
RPS3AP61247 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 FAM197Y4-202ENST00000622692 608 ntBASIC17.89■□□□□ 0.45
RPS3AP61247 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.89■□□□□ 0.45
RPS3AP61247 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.89■□□□□ 0.45
RPS3AP61247 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPS3AP61247 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RPS3AP61247 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RPS3AP61247 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RPS3AP61247 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS3AP61247 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RPS3AP61247 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.88■□□□□ 0.45
RPS3AP61247 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.88■□□□□ 0.45
RPS3AP61247 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.88■□□□□ 0.45
RPS3AP61247 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RPS3AP61247 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPS3AP61247 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RPS3AP61247 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms