Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CMC4P56277 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.29□□□□□ -0.12
CMC4P56277 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CMC4P56277 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.29□□□□□ -0.12
CMC4P56277 Z85996.1-201ENST00000494644 937 ntBASIC14.29□□□□□ -0.12
CMC4P56277 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.29□□□□□ -0.12
CMC4P56277 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.29□□□□□ -0.12
CMC4P56277 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.29□□□□□ -0.12
CMC4P56277 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
CMC4P56277 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CMC4P56277 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CMC4P56277 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.29□□□□□ -0.12
CMC4P56277 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CMC4P56277 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CMC4P56277 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.28□□□□□ -0.12
CMC4P56277 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.28□□□□□ -0.12
CMC4P56277 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 TSPY7P-201ENST00000431358 1114 ntBASIC14.28□□□□□ -0.12
CMC4P56277 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CMC4P56277 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.28□□□□□ -0.12
CMC4P56277 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.28□□□□□ -0.12
CMC4P56277 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CMC4P56277 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CMC4P56277 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CMC4P56277 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CMC4P56277 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CMC4P56277 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CMC4P56277 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CMC4P56277 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CMC4P56277 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.27□□□□□ -0.12
CMC4P56277 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.27□□□□□ -0.12
CMC4P56277 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.27□□□□□ -0.12
CMC4P56277 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.27□□□□□ -0.12
CMC4P56277 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CMC4P56277 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.27□□□□□ -0.12
CMC4P56277 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CMC4P56277 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CMC4P56277 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.27□□□□□ -0.13
CMC4P56277 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 AC091390.4-202ENST00000476426 537 ntBASIC14.27□□□□□ -0.13
CMC4P56277 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CMC4P56277 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 AC097488.1-201ENST00000507834 756 ntBASIC14.27□□□□□ -0.13
CMC4P56277 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CMC4P56277 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.27□□□□□ -0.13
CMC4P56277 SLC25A1P4-201ENST00000567977 778 ntBASIC14.27□□□□□ -0.13
CMC4P56277 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.27□□□□□ -0.13
CMC4P56277 REXO1L10P-201ENST00000615707 1290 ntBASIC14.27□□□□□ -0.13
CMC4P56277 REXO1L12P-201ENST00000622156 912 ntBASIC14.27□□□□□ -0.13
CMC4P56277 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CMC4P56277 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.27□□□□□ -0.13
CMC4P56277 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.27□□□□□ -0.13
CMC4P56277 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.27□□□□□ -0.13
CMC4P56277 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.27□□□□□ -0.13
CMC4P56277 Z82202.1-201ENST00000623446 1880 ntBASIC14.27□□□□□ -0.13
CMC4P56277 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMC4P56277 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CMC4P56277 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.26□□□□□ -0.13
CMC4P56277 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.26□□□□□ -0.13
CMC4P56277 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMC4P56277 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms