Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH11P55287 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH11P55287 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 KRT17P3-201ENST00000420566 1262 ntBASIC17.53■□□□□ 0.4
CDH11P55287 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.53■□□□□ 0.4
CDH11P55287 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH11P55287 AP006294.2-201ENST00000641667 209 ntBASIC17.53■□□□□ 0.4
CDH11P55287 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH11P55287 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH11P55287 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH11P55287 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH11P55287 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CDH11P55287 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH11P55287 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH11P55287 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH11P55287 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH11P55287 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH11P55287 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH11P55287 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH11P55287 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH11P55287 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDH11P55287 AL049812.1-201ENST00000432563 2267 ntBASIC17.52■□□□□ 0.4
CDH11P55287 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH11P55287 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH11P55287 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH11P55287 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CDH11P55287 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH11P55287 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH11P55287 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.52■□□□□ 0.39
CDH11P55287 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDH11P55287 AC141586.3-201ENST00000562166 1838 ntBASIC17.51■□□□□ 0.39
CDH11P55287 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH11P55287 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH11P55287 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH11P55287 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CDH11P55287 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH11P55287 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CDH11P55287 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CDH11P55287 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDH11P55287 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH11P55287 AC006333.2-201ENST00000607957 2099 ntBASIC17.51■□□□□ 0.39
CDH11P55287 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH11P55287 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH11P55287 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH11P55287 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH11P55287 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH11P55287 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH11P55287 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH11P55287 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH11P55287 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms