Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PMS2P54278 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS2P54278 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PMS2P54278 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.76■□□□□ 0.75
PMS2P54278 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.76■□□□□ 0.75
PMS2P54278 PCDHB18P-201ENST00000524813 2368 ntBASIC19.76■□□□□ 0.75
PMS2P54278 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PMS2P54278 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.76■□□□□ 0.75
PMS2P54278 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.75■□□□□ 0.75
PMS2P54278 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.75■□□□□ 0.75
PMS2P54278 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PMS2P54278 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.75■□□□□ 0.75
PMS2P54278 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 AL355472.2-201ENST00000422958 438 ntBASIC19.75■□□□□ 0.75
PMS2P54278 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.75■□□□□ 0.75
PMS2P54278 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PMS2P54278 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.75■□□□□ 0.75
PMS2P54278 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.75■□□□□ 0.75
PMS2P54278 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.75■□□□□ 0.75
PMS2P54278 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
PMS2P54278 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PMS2P54278 AC068338.2-201ENST00000563278 1430 ntBASIC19.75■□□□□ 0.75
PMS2P54278 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS2P54278 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PMS2P54278 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.74■□□□□ 0.75
PMS2P54278 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 NOC2LP1-202ENST00000452600 2235 ntBASIC19.74■□□□□ 0.75
PMS2P54278 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.74■□□□□ 0.75
PMS2P54278 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.74■□□□□ 0.75
PMS2P54278 POU5F1P3-201ENST00000428824 1078 ntBASIC19.74■□□□□ 0.75
PMS2P54278 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.74■□□□□ 0.75
PMS2P54278 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 MKRN4P-201ENST00000444706 1521 ntBASIC19.74■□□□□ 0.75
PMS2P54278 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.74■□□□□ 0.75
PMS2P54278 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.74■□□□□ 0.75
PMS2P54278 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.74■□□□□ 0.75
PMS2P54278 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 IRX1P1-201ENST00000438849 1838 ntBASIC19.74■□□□□ 0.75
PMS2P54278 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS2P54278 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PMS2P54278 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.73■□□□□ 0.75
PMS2P54278 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PMS2P54278 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PMS2P54278 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
PMS2P54278 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 MIPEPP3-201ENST00000412105 444 ntBASIC19.73■□□□□ 0.75
PMS2P54278 OR10C1-204ENST00000622521 1039 ntBASIC19.73■□□□□ 0.75
PMS2P54278 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.73■□□□□ 0.75
PMS2P54278 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PMS2P54278 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.73■□□□□ 0.75
PMS2P54278 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.73■□□□□ 0.75
PMS2P54278 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.73■□□□□ 0.75
PMS2P54278 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.73■□□□□ 0.75
PMS2P54278 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PMS2P54278 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.72■□□□□ 0.75
PMS2P54278 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PMS2P54278 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms