Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.31■□□□□ 0.68
LIMK2P53671 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.31■□□□□ 0.68
LIMK2P53671 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.31■□□□□ 0.68
LIMK2P53671 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIMK2P53671 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LIMK2P53671 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.31■□□□□ 0.68
LIMK2P53671 AC006333.2-201ENST00000607957 2099 ntBASIC19.31■□□□□ 0.68
LIMK2P53671 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LIMK2P53671 AP006587.1-201ENST00000534129 1502 ntBASIC19.3■□□□□ 0.68
LIMK2P53671 SDHAP1-207ENST00000440850 2000 ntBASIC19.3■□□□□ 0.68
LIMK2P53671 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.3■□□□□ 0.68
LIMK2P53671 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LIMK2P53671 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.3■□□□□ 0.68
LIMK2P53671 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.3■□□□□ 0.68
LIMK2P53671 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LIMK2P53671 TSPY7P-201ENST00000431358 1114 ntBASIC19.3■□□□□ 0.68
LIMK2P53671 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.3■□□□□ 0.68
LIMK2P53671 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.3■□□□□ 0.68
LIMK2P53671 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.3■□□□□ 0.68
LIMK2P53671 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.3■□□□□ 0.68
LIMK2P53671 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.3■□□□□ 0.68
LIMK2P53671 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.3■□□□□ 0.68
LIMK2P53671 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.3■□□□□ 0.68
LIMK2P53671 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.3■□□□□ 0.68
LIMK2P53671 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LIMK2P53671 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
LIMK2P53671 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.3■□□□□ 0.68
LIMK2P53671 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.3■□□□□ 0.68
LIMK2P53671 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.3■□□□□ 0.68
LIMK2P53671 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.3■□□□□ 0.68
LIMK2P53671 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIMK2P53671 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.29■□□□□ 0.68
LIMK2P53671 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LIMK2P53671 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LIMK2P53671 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.29■□□□□ 0.68
LIMK2P53671 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 KRT8P8-201ENST00000434750 1448 ntBASIC19.29■□□□□ 0.68
LIMK2P53671 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.29■□□□□ 0.68
LIMK2P53671 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.29■□□□□ 0.68
LIMK2P53671 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.29■□□□□ 0.68
LIMK2P53671 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LIMK2P53671 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.29■□□□□ 0.68
LIMK2P53671 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.29■□□□□ 0.68
LIMK2P53671 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LIMK2P53671 REXO1L12P-201ENST00000622156 912 ntBASIC19.29■□□□□ 0.68
LIMK2P53671 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LIMK2P53671 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LIMK2P53671 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIMK2P53671 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LIMK2P53671 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.28■□□□□ 0.68
LIMK2P53671 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.28■□□□□ 0.68
LIMK2P53671 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.28■□□□□ 0.68
LIMK2P53671 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.28■□□□□ 0.68
LIMK2P53671 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.28■□□□□ 0.68
LIMK2P53671 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LIMK2P53671 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.28■□□□□ 0.68
LIMK2P53671 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LIMK2P53671 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LIMK2P53671 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIMK2P53671 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LIMK2P53671 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LIMK2P53671 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LIMK2P53671 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LIMK2P53671 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms