Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
GTF2A1P52655 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GTF2A1P52655 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.8■□□□□ 0.6
GTF2A1P52655 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 pRNA.6-201ENST00000610482 90 ntBASIC18.8■□□□□ 0.6
GTF2A1P52655 pRNA.5-201ENST00000612139 90 ntBASIC18.8■□□□□ 0.6
GTF2A1P52655 pRNA.11-201ENST00000618423 90 ntBASIC18.8■□□□□ 0.6
GTF2A1P52655 pRNA.13-201ENST00000619112 90 ntBASIC18.8■□□□□ 0.6
GTF2A1P52655 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.8■□□□□ 0.6
GTF2A1P52655 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GTF2A1P52655 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.8■□□□□ 0.6
GTF2A1P52655 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
GTF2A1P52655 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.79■□□□□ 0.6
GTF2A1P52655 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 AC239859.2-201ENST00000444165 318 ntBASIC18.79■□□□□ 0.6
GTF2A1P52655 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 AC241377.3-202ENST00000626088 1088 ntBASIC18.79■□□□□ 0.6
GTF2A1P52655 AC241585.3-202ENST00000628937 1088 ntBASIC18.79■□□□□ 0.6
GTF2A1P52655 AC245100.8-202ENST00000629247 1058 ntBASIC18.79■□□□□ 0.6
GTF2A1P52655 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
GTF2A1P52655 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
GTF2A1P52655 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GTF2A1P52655 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GTF2A1P52655 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.78■□□□□ 0.6
GTF2A1P52655 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.78■□□□□ 0.6
GTF2A1P52655 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GTF2A1P52655 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GTF2A1P52655 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GTF2A1P52655 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.78■□□□□ 0.6
GTF2A1P52655 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GTF2A1P52655 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.78■□□□□ 0.6
GTF2A1P52655 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GTF2A1P52655 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GTF2A1P52655 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GTF2A1P52655 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GTF2A1P52655 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.78■□□□□ 0.6
GTF2A1P52655 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.77■□□□□ 0.6
GTF2A1P52655 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.77■□□□□ 0.6
GTF2A1P52655 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
GTF2A1P52655 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GTF2A1P52655 AC006333.2-201ENST00000607957 2099 ntBASIC18.77■□□□□ 0.6
GTF2A1P52655 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
GTF2A1P52655 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.77■□□□□ 0.6
GTF2A1P52655 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.77■□□□□ 0.6
GTF2A1P52655 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GTF2A1P52655 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GTF2A1P52655 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms