Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 ABHD17AP1-201ENST00000358206 933 ntBASIC18.5■□□□□ 0.55
SLC6A12P48065 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC6A12P48065 GCSHP5-201ENST00000443090 522 ntBASIC18.5■□□□□ 0.55
SLC6A12P48065 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.5■□□□□ 0.55
SLC6A12P48065 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.5■□□□□ 0.55
SLC6A12P48065 AC026271.3-201ENST00000571884 352 ntBASIC18.5■□□□□ 0.55
SLC6A12P48065 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC6A12P48065 AC073195.1-201ENST00000607241 877 ntBASIC18.5■□□□□ 0.55
SLC6A12P48065 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC6A12P48065 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC6A12P48065 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC6A12P48065 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SLC6A12P48065 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A12P48065 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SLC6A12P48065 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SLC6A12P48065 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC6A12P48065 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC6A12P48065 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC6A12P48065 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A12P48065 AC142381.4-202ENST00000563973 229 ntBASIC18.49■□□□□ 0.55
SLC6A12P48065 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC6A12P48065 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 AL020996.1-203ENST00000536896 2307 ntBASIC18.49■□□□□ 0.55
SLC6A12P48065 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC6A12P48065 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A12P48065 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A12P48065 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SLC6A12P48065 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A12P48065 RCC2P6-201ENST00000526625 1557 ntBASIC18.48■□□□□ 0.55
SLC6A12P48065 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A12P48065 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC6A12P48065 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC6A12P48065 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A12P48065 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A12P48065 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A12P48065 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC6A12P48065 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC6A12P48065 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC6A12P48065 CR392000.1-201ENST00000624770 1228 ntBASIC18.48■□□□□ 0.55
SLC6A12P48065 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A12P48065 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC6A12P48065 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A12P48065 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
SLC6A12P48065 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A12P48065 KRT8P11-201ENST00000409686 1436 ntBASIC18.48■□□□□ 0.55
SLC6A12P48065 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC6A12P48065 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A12P48065 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC6A12P48065 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 AC091390.4-202ENST00000476426 537 ntBASIC18.47■□□□□ 0.55
SLC6A12P48065 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A12P48065 AL031985.4-201ENST00000642138 673 ntBASIC18.47■□□□□ 0.55
SLC6A12P48065 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC6A12P48065 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC6A12P48065 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC6A12P48065 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC6A12P48065 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC6A12P48065 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC6A12P48065 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms