Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
SOX6P35712 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.16■□□□□ 0.34
SOX6P35712 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX6P35712 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 AL354811.1-201ENST00000610286 706 ntBASIC17.16■□□□□ 0.34
SOX6P35712 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX6P35712 AL358852.1-201ENST00000623174 1268 ntBASIC17.16■□□□□ 0.34
SOX6P35712 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.16■□□□□ 0.34
SOX6P35712 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.16■□□□□ 0.34
SOX6P35712 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SOX6P35712 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SOX6P35712 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX6P35712 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 AC012313.1-201ENST00000593393 3059 ntBASIC17.15■□□□□ 0.34
SOX6P35712 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SOX6P35712 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SOX6P35712 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SOX6P35712 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SOX6P35712 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 ZNRF2P3-201ENST00000424200 374 ntBASIC17.15■□□□□ 0.34
SOX6P35712 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.15■□□□□ 0.34
SOX6P35712 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.15■□□□□ 0.34
SOX6P35712 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.15■□□□□ 0.34
SOX6P35712 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX6P35712 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 AC139713.2-201ENST00000641328 2723 ntBASIC17.15■□□□□ 0.34
SOX6P35712 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.15■□□□□ 0.34
SOX6P35712 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX6P35712 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX6P35712 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SOX6P35712 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.14■□□□□ 0.34
SOX6P35712 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
SOX6P35712 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.14■□□□□ 0.34
SOX6P35712 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
SOX6P35712 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SOX6P35712 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.14■□□□□ 0.33
SOX6P35712 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SOX6P35712 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX6P35712 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SOX6P35712 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX6P35712 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.13■□□□□ 0.33
SOX6P35712 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SOX6P35712 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.13■□□□□ 0.33
SOX6P35712 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SOX6P35712 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms