Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLCN1P35523 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN1P35523 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCN1P35523 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.75■■□□□ 1.07
CLCN1P35523 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCN1P35523 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN1P35523 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN1P35523 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.74■■□□□ 1.07
CLCN1P35523 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CLCN1P35523 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.74■■□□□ 1.07
CLCN1P35523 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.74■■□□□ 1.07
CLCN1P35523 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CLCN1P35523 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.74■■□□□ 1.07
CLCN1P35523 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.74■■□□□ 1.07
CLCN1P35523 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLCN1P35523 CYP21A1P-202ENST00000354927 1481 ntBASIC21.74■■□□□ 1.07
CLCN1P35523 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLCN1P35523 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLCN1P35523 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CLCN1P35523 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN1P35523 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.73■■□□□ 1.07
CLCN1P35523 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN1P35523 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN1P35523 RARRES2P4-201ENST00000514074 484 ntBASIC21.73■■□□□ 1.07
CLCN1P35523 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN1P35523 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.73■■□□□ 1.07
CLCN1P35523 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN1P35523 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN1P35523 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN1P35523 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN1P35523 AC087633.2-202ENST00000565166 1439 ntBASIC21.72■■□□□ 1.07
CLCN1P35523 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN1P35523 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN1P35523 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN1P35523 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCN1P35523 AC004911.1-201ENST00000416316 871 ntBASIC21.72■■□□□ 1.07
CLCN1P35523 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.72■■□□□ 1.07
CLCN1P35523 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN1P35523 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CLCN1P35523 AL391005.1-201ENST00000623953 2435 ntBASIC21.72■■□□□ 1.07
CLCN1P35523 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN1P35523 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN1P35523 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN1P35523 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
CLCN1P35523 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CLCN1P35523 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN1P35523 AC126763.1-201ENST00000552015 2118 ntBASIC21.71■■□□□ 1.07
CLCN1P35523 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.71■■□□□ 1.07
CLCN1P35523 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLCN1P35523 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN1P35523 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN1P35523 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms