Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.94■□□□□ 0.94
HOXC8P31273 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXC8P31273 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXC8P31273 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC8P31273 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC8P31273 AL157384.1-201ENST00000445995 2473 ntBASIC20.93■□□□□ 0.94
HOXC8P31273 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC8P31273 ATP5G2P1-201ENST00000433580 426 ntBASIC20.93■□□□□ 0.94
HOXC8P31273 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXC8P31273 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC8P31273 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC8P31273 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXC8P31273 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC8P31273 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC8P31273 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC8P31273 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXC8P31273 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
HOXC8P31273 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC8P31273 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXC8P31273 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXC8P31273 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 AC036111.1-201ENST00000533973 1582 ntBASIC20.92■□□□□ 0.94
HOXC8P31273 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC8P31273 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXC8P31273 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC8P31273 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HOXC8P31273 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HOXC8P31273 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXC8P31273 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC8P31273 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC8P31273 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXC8P31273 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC8P31273 HCG4P8-203ENST00000443049 980 ntBASIC20.91■□□□□ 0.94
HOXC8P31273 AC092597.1-201ENST00000487352 616 ntBASIC20.91■□□□□ 0.94
HOXC8P31273 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXC8P31273 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXC8P31273 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC8P31273 MIR3180-5-201ENST00000583743 153 ntBASIC20.91■□□□□ 0.94
HOXC8P31273 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.91■□□□□ 0.94
HOXC8P31273 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXC8P31273 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HOXC8P31273 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 NPAP1P7-201ENST00000613027 823 ntBASIC20.91■□□□□ 0.94
HOXC8P31273 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC8P31273 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC8P31273 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HOXC8P31273 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXC8P31273 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HOXC8P31273 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.9■□□□□ 0.94
HOXC8P31273 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC8P31273 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HOXC8P31273 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC8P31273 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
HOXC8P31273 SEC1P-202ENST00000473944 940 ntBASIC20.9■□□□□ 0.94
HOXC8P31273 AC034232.1-201ENST00000506026 1064 ntBASIC20.9■□□□□ 0.94
HOXC8P31273 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
HOXC8P31273 AC112907.3-201ENST00000577781 2400 ntBASIC20.9■□□□□ 0.94
HOXC8P31273 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HOXC8P31273 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC8P31273 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HOXC8P31273 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HOXC8P31273 TREX1-205ENST00000625293 1783 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms