Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 SDHAP1-207ENST00000440850 2000 ntBASIC17.38■□□□□ 0.37
GDF1P27539 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GDF1P27539 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.38■□□□□ 0.37
GDF1P27539 SLC25A3P1-201ENST00000443844 931 ntBASIC17.38■□□□□ 0.37
GDF1P27539 ECEL1P2-202ENST00000465689 757 ntBASIC17.38■□□□□ 0.37
GDF1P27539 PRSS44-201ENST00000515154 1146 ntBASIC17.38■□□□□ 0.37
GDF1P27539 CKBP1-201ENST00000565489 1086 ntBASIC17.38■□□□□ 0.37
GDF1P27539 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.38■□□□□ 0.37
GDF1P27539 AC116562.4-202ENST00000641738 218 ntBASIC17.38■□□□□ 0.37
GDF1P27539 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GDF1P27539 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF1P27539 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF1P27539 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GDF1P27539 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.38■□□□□ 0.37
GDF1P27539 TREX1-205ENST00000625293 1783 ntBASIC17.38■□□□□ 0.37
GDF1P27539 KRT8P11-201ENST00000409686 1436 ntBASIC17.38■□□□□ 0.37
GDF1P27539 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.38■□□□□ 0.37
GDF1P27539 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.37■□□□□ 0.37
GDF1P27539 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF1P27539 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.37■□□□□ 0.37
GDF1P27539 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF1P27539 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.37■□□□□ 0.37
GDF1P27539 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.37■□□□□ 0.37
GDF1P27539 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF1P27539 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
GDF1P27539 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF1P27539 RCN1P1-201ENST00000400413 996 ntBASIC17.37■□□□□ 0.37
GDF1P27539 AC113347.1-201ENST00000413321 391 ntBASIC17.37■□□□□ 0.37
GDF1P27539 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GDF1P27539 SLC25A1P2-201ENST00000430693 912 ntBASIC17.37■□□□□ 0.37
GDF1P27539 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.37■□□□□ 0.37
GDF1P27539 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
GDF1P27539 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.37■□□□□ 0.37
GDF1P27539 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF1P27539 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 AC125437.2-201ENST00000625180 2167 ntBASIC17.37■□□□□ 0.37
GDF1P27539 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.37■□□□□ 0.37
GDF1P27539 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GDF1P27539 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.37■□□□□ 0.37
GDF1P27539 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.37■□□□□ 0.37
GDF1P27539 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.37■□□□□ 0.37
GDF1P27539 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GDF1P27539 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.36■□□□□ 0.37
GDF1P27539 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
GDF1P27539 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.36■□□□□ 0.37
GDF1P27539 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 AC005521.1-201ENST00000393351 872 ntBASIC17.36■□□□□ 0.37
GDF1P27539 LIN28AP1-201ENST00000429574 405 ntBASIC17.36■□□□□ 0.37
GDF1P27539 AL137013.1-201ENST00000432946 1228 ntBASIC17.36■□□□□ 0.37
GDF1P27539 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.36■□□□□ 0.37
GDF1P27539 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.36■□□□□ 0.37
GDF1P27539 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDF1P27539 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.35■□□□□ 0.37
GDF1P27539 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDF1P27539 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms