Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.81■□□□□ 0.6
VARSP26640 MTDHP1-201ENST00000605323 784 ntBASIC18.81■□□□□ 0.6
VARSP26640 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VARSP26640 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VARSP26640 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VARSP26640 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VARSP26640 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
VARSP26640 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.8■□□□□ 0.6
VARSP26640 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.8■□□□□ 0.6
VARSP26640 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.8■□□□□ 0.6
VARSP26640 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.8■□□□□ 0.6
VARSP26640 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.8■□□□□ 0.6
VARSP26640 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.8■□□□□ 0.6
VARSP26640 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.8■□□□□ 0.6
VARSP26640 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.8■□□□□ 0.6
VARSP26640 PRKY-204ENST00000533551 1019 ntBASIC18.8■□□□□ 0.6
VARSP26640 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
VARSP26640 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
VARSP26640 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VARSP26640 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VARSP26640 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
VARSP26640 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.79■□□□□ 0.6
VARSP26640 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
VARSP26640 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VARSP26640 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
VARSP26640 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.79■□□□□ 0.6
VARSP26640 MIR1224-201ENST00000408193 85 ntBASIC18.79■□□□□ 0.6
VARSP26640 AC012618.2-201ENST00000428058 849 ntBASIC18.79■□□□□ 0.6
VARSP26640 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.79■□□□□ 0.6
VARSP26640 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.79■□□□□ 0.6
VARSP26640 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.79■□□□□ 0.6
VARSP26640 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
VARSP26640 AL023875.1-201ENST00000640777 796 ntBASIC18.79■□□□□ 0.6
VARSP26640 AC093503.3-201ENST00000624917 2352 ntBASIC18.79■□□□□ 0.6
VARSP26640 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.79■□□□□ 0.6
VARSP26640 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.79■□□□□ 0.6
VARSP26640 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VARSP26640 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VARSP26640 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.78■□□□□ 0.6
VARSP26640 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.78■□□□□ 0.6
VARSP26640 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VARSP26640 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VARSP26640 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
VARSP26640 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VARSP26640 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.78■□□□□ 0.6
VARSP26640 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
VARSP26640 AL135905.2-201ENST00000584934 1404 ntBASIC18.78■□□□□ 0.6
VARSP26640 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.78■□□□□ 0.6
VARSP26640 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.78■□□□□ 0.6
VARSP26640 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VARSP26640 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms