Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL1P22362 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL1P22362 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 AC069544.1-201ENST00000609399 999 ntBASIC16.5■□□□□ 0.23
CCL1P22362 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.5■□□□□ 0.23
CCL1P22362 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
CCL1P22362 WIZP1-201ENST00000531444 2299 ntBASIC16.5■□□□□ 0.23
CCL1P22362 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL1P22362 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL1P22362 NEFHP1-201ENST00000412845 2629 ntBASIC16.49■□□□□ 0.23
CCL1P22362 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.49■□□□□ 0.23
CCL1P22362 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCL1P22362 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL1P22362 AL355802.2-201ENST00000402069 882 ntBASIC16.49■□□□□ 0.23
CCL1P22362 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.49■□□□□ 0.23
CCL1P22362 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CCL1P22362 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL1P22362 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCL1P22362 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CCL1P22362 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL1P22362 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL1P22362 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCL1P22362 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCL1P22362 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 KRT17P3-201ENST00000420566 1262 ntBASIC16.48■□□□□ 0.23
CCL1P22362 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL1P22362 AC026366.1-201ENST00000488803 879 ntBASIC16.48■□□□□ 0.23
CCL1P22362 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL1P22362 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.48■□□□□ 0.23
CCL1P22362 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.48■□□□□ 0.23
CCL1P22362 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 KRT8P41-201ENST00000533985 1514 ntBASIC16.48■□□□□ 0.23
CCL1P22362 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL1P22362 AC009113.1-201ENST00000570267 2443 ntBASIC16.48■□□□□ 0.23
CCL1P22362 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 AC090164.3-201ENST00000610780 2143 ntBASIC16.48■□□□□ 0.23
CCL1P22362 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCL1P22362 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCL1P22362 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.47■□□□□ 0.23
CCL1P22362 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.47■□□□□ 0.23
CCL1P22362 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL1P22362 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.47■□□□□ 0.23
CCL1P22362 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL1P22362 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.47■□□□□ 0.23
CCL1P22362 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCL1P22362 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCL1P22362 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms