Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DPA1P20036 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 HCG11-201ENST00000411553 5696 ntBASIC19.34■□□□□ 0.69
HLA-DPA1P20036 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DPA1P20036 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DPA1P20036 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
HLA-DPA1P20036 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DPA1P20036 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DPA1P20036 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DPA1P20036 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HLA-DPA1P20036 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 AC026271.3-201ENST00000571884 352 ntBASIC19.33■□□□□ 0.68
HLA-DPA1P20036 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 KRT8P41-201ENST00000533985 1514 ntBASIC19.33■□□□□ 0.68
HLA-DPA1P20036 BX323043.1-201ENST00000641006 1765 ntBASIC19.33■□□□□ 0.68
HLA-DPA1P20036 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HLA-DPA1P20036 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 CR392000.1-201ENST00000624770 1228 ntBASIC19.32■□□□□ 0.68
HLA-DPA1P20036 AL031985.4-201ENST00000642138 673 ntBASIC19.32■□□□□ 0.68
HLA-DPA1P20036 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HLA-DPA1P20036 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 AC012618.2-201ENST00000428058 849 ntBASIC19.31■□□□□ 0.68
HLA-DPA1P20036 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.31■□□□□ 0.68
HLA-DPA1P20036 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.3■□□□□ 0.68
HLA-DPA1P20036 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms