Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.72■□□□□ 0.75
ERCC2P18074 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
ERCC2P18074 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC2P18074 AL049812.1-201ENST00000432563 2267 ntBASIC19.72■□□□□ 0.75
ERCC2P18074 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC2P18074 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ERCC2P18074 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC2P18074 TSPY21P-201ENST00000433481 731 ntBASIC19.72■□□□□ 0.75
ERCC2P18074 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 AC091390.4-202ENST00000476426 537 ntBASIC19.72■□□□□ 0.75
ERCC2P18074 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ERCC2P18074 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.72■□□□□ 0.75
ERCC2P18074 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC2P18074 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC2P18074 AC087289.5-201ENST00000586076 3175 ntBASIC19.71■□□□□ 0.75
ERCC2P18074 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 AP000974.1-201ENST00000623909 2387 ntBASIC19.71■□□□□ 0.75
ERCC2P18074 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ERCC2P18074 AC018445.3-201ENST00000624177 1945 ntBASIC19.71■□□□□ 0.75
ERCC2P18074 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC2P18074 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC2P18074 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ERCC2P18074 AC004951.3-201ENST00000418645 1148 ntBASIC19.71■□□□□ 0.75
ERCC2P18074 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC2P18074 AC011506.1-201ENST00000474329 610 ntBASIC19.71■□□□□ 0.75
ERCC2P18074 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC2P18074 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ERCC2P18074 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ERCC2P18074 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC2P18074 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.71■□□□□ 0.75
ERCC2P18074 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC2P18074 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC2P18074 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERCC2P18074 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC2P18074 AIRN-201ENST00000601203 4374 ntBASIC19.71■□□□□ 0.75
ERCC2P18074 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC2P18074 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ERCC2P18074 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC2P18074 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC2P18074 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.7■□□□□ 0.74
ERCC2P18074 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ERCC2P18074 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ERCC2P18074 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ERCC2P18074 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC2P18074 AC008040.2-201ENST00000461049 708 ntBASIC19.7■□□□□ 0.74
ERCC2P18074 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC2P18074 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.7■□□□□ 0.74
ERCC2P18074 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 AP006294.2-201ENST00000641667 209 ntBASIC19.7■□□□□ 0.74
ERCC2P18074 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC2P18074 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC2P18074 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ERCC2P18074 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC2P18074 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 FP475955.4-201ENST00000623131 1990 ntBASIC19.7■□□□□ 0.74
ERCC2P18074 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC2P18074 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ERCC2P18074 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 AC098818.2-201ENST00000564925 2320 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC2P18074 FEM1AP3-201ENST00000403722 1741 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC2P18074 MIR718-201ENST00000390190 70 ntBASIC19.69■□□□□ 0.74
ERCC2P18074 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ERCC2P18074 MESTP1-201ENST00000404287 994 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms