Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH1P12830 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CDH1P12830 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CDH1P12830 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH1P12830 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH1P12830 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH1P12830 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDH1P12830 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH1P12830 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH1P12830 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 HTR7P1-201ENST00000538670 1336 ntBASIC18.67■□□□□ 0.58
CDH1P12830 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH1P12830 LETM1P2-201ENST00000597330 2178 ntBASIC18.66■□□□□ 0.58
CDH1P12830 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 LINC01465-201ENST00000408887 1940 ntBASIC18.66■□□□□ 0.58
CDH1P12830 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.66■□□□□ 0.58
CDH1P12830 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.66■□□□□ 0.58
CDH1P12830 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH1P12830 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 HLA-A-209ENST00000638375 975 ntBASIC18.66■□□□□ 0.58
CDH1P12830 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDH1P12830 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH1P12830 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH1P12830 AC104417.2-201ENST00000562989 1793 ntBASIC18.65■□□□□ 0.58
CDH1P12830 AL032819.2-201ENST00000624543 2162 ntBASIC18.65■□□□□ 0.58
CDH1P12830 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH1P12830 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH1P12830 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH1P12830 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH1P12830 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH1P12830 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH1P12830 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH1P12830 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH1P12830 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH1P12830 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH1P12830 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH1P12830 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH1P12830 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDH1P12830 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CDH1P12830 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH1P12830 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH1P12830 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CDH1P12830 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH1P12830 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH1P12830 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH1P12830 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH1P12830 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH1P12830 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH1P12830 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH1P12830 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH1P12830 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH1P12830 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH1P12830 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms