Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SRFP11831 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SRFP11831 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SRFP11831 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRFP11831 AL023284.2-201ENST00000405850 579 ntBASIC19.41■□□□□ 0.7
SRFP11831 LINC00265-3P-201ENST00000447588 903 ntBASIC19.41■□□□□ 0.7
SRFP11831 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFP11831 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFP11831 AP000867.3-201ENST00000524675 377 ntBASIC19.41■□□□□ 0.7
SRFP11831 MIR3180-5-201ENST00000583743 153 ntBASIC19.41■□□□□ 0.7
SRFP11831 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.41■□□□□ 0.7
SRFP11831 AL136038.4-201ENST00000603606 1261 ntBASIC19.41■□□□□ 0.7
SRFP11831 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRFP11831 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
SRFP11831 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFP11831 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFP11831 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFP11831 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRFP11831 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFP11831 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFP11831 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SRFP11831 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFP11831 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SRFP11831 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRFP11831 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 AC104417.2-201ENST00000562989 1793 ntBASIC19.4■□□□□ 0.7
SRFP11831 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 AC079781.3-201ENST00000449110 356 ntBASIC19.4■□□□□ 0.7
SRFP11831 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.4■□□□□ 0.7
SRFP11831 AC012615.1-201ENST00000565797 1299 ntBASIC19.4■□□□□ 0.7
SRFP11831 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.4■□□□□ 0.7
SRFP11831 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.4■□□□□ 0.7
SRFP11831 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRFP11831 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.4■□□□□ 0.7
SRFP11831 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRFP11831 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFP11831 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRFP11831 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.4■□□□□ 0.7
SRFP11831 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRFP11831 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRFP11831 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRFP11831 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.39■□□□□ 0.69
SRFP11831 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SRFP11831 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.39■□□□□ 0.69
SRFP11831 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.39■□□□□ 0.69
SRFP11831 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.39■□□□□ 0.69
SRFP11831 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.39■□□□□ 0.69
SRFP11831 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.39■□□□□ 0.69
SRFP11831 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SRFP11831 AL157888.1-201ENST00000631930 593 ntBASIC19.39■□□□□ 0.69
SRFP11831 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.39■□□□□ 0.69
SRFP11831 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.39■□□□□ 0.69
SRFP11831 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SRFP11831 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFP11831 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFP11831 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFP11831 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRFP11831 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.38■□□□□ 0.69
SRFP11831 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFP11831 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFP11831 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SRFP11831 MCCD1P1-208ENST00000445732 328 ntBASIC19.38■□□□□ 0.69
SRFP11831 KRT18P31-201ENST00000506277 1292 ntBASIC19.38■□□□□ 0.69
SRFP11831 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFP11831 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.38■□□□□ 0.69
SRFP11831 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SRFP11831 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SRFP11831 AL391807.1-203ENST00000604392 2365 ntBASIC19.38■□□□□ 0.69
SRFP11831 AL691432.2-201ENST00000607222 2038 ntBASIC19.38■□□□□ 0.69
SRFP11831 AC020907.5-201ENST00000624372 1936 ntBASIC19.38■□□□□ 0.69
SRFP11831 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SRFP11831 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SRFP11831 AP005212.1-201ENST00000581547 1997 ntBASIC19.37■□□□□ 0.69
SRFP11831 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.37■□□□□ 0.69
SRFP11831 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
SRFP11831 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.37■□□□□ 0.69
SRFP11831 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFP11831 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms