Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.11■□□□□ 0.81
RARAP10276 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.11■□□□□ 0.81
RARAP10276 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.11■□□□□ 0.81
RARAP10276 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RARAP10276 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RARAP10276 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RARAP10276 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RARAP10276 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.11■□□□□ 0.81
RARAP10276 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.1■□□□□ 0.81
RARAP10276 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
RARAP10276 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
RARAP10276 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 KRASP1-201ENST00000407852 552 ntBASIC20.1■□□□□ 0.81
RARAP10276 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.1■□□□□ 0.81
RARAP10276 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
RARAP10276 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 AC006058.3-201ENST00000606217 1069 ntBASIC20.1■□□□□ 0.81
RARAP10276 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RARAP10276 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.1■□□□□ 0.81
RARAP10276 AC073648.6-201ENST00000641589 218 ntBASIC20.1■□□□□ 0.81
RARAP10276 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.1■□□□□ 0.81
RARAP10276 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RARAP10276 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.09■□□□□ 0.81
RARAP10276 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.09■□□□□ 0.81
RARAP10276 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.09■□□□□ 0.81
RARAP10276 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.09■□□□□ 0.81
RARAP10276 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RARAP10276 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.09■□□□□ 0.81
RARAP10276 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.09■□□□□ 0.81
RARAP10276 RN7SL471P-201ENST00000580476 299 ntBASIC20.09■□□□□ 0.81
RARAP10276 AC004264.1-201ENST00000608354 794 ntBASIC20.09■□□□□ 0.81
RARAP10276 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.09■□□□□ 0.81
RARAP10276 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.09■□□□□ 0.81
RARAP10276 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RARAP10276 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RARAP10276 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RARAP10276 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.08■□□□□ 0.81
RARAP10276 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
RARAP10276 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
RARAP10276 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RARAP10276 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RARAP10276 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.08■□□□□ 0.81
RARAP10276 AC239809.2-201ENST00000415381 517 ntBASIC20.08■□□□□ 0.81
RARAP10276 C1QL1P1-201ENST00000568105 661 ntBASIC20.08■□□□□ 0.81
RARAP10276 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.08■□□□□ 0.81
RARAP10276 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RARAP10276 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RARAP10276 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RARAP10276 FP475955.4-201ENST00000623131 1990 ntBASIC20.08■□□□□ 0.8
RARAP10276 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RARAP10276 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RARAP10276 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RARAP10276 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RARAP10276 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.07■□□□□ 0.8
RARAP10276 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.07■□□□□ 0.8
RARAP10276 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
RARAP10276 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.07■□□□□ 0.8
RARAP10276 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RARAP10276 POU5F1P3-201ENST00000428824 1078 ntBASIC20.07■□□□□ 0.8
RARAP10276 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms