Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.21■□□□□ 0.83
SOD2P04179 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.21■□□□□ 0.83
SOD2P04179 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SOD2P04179 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.2■□□□□ 0.83
SOD2P04179 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SOD2P04179 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.2■□□□□ 0.82
SOD2P04179 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 GPAT2P1-201ENST00000444924 1672 ntBASIC20.2■□□□□ 0.82
SOD2P04179 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SOD2P04179 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.2■□□□□ 0.82
SOD2P04179 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.2■□□□□ 0.82
SOD2P04179 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.2■□□□□ 0.82
SOD2P04179 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SOD2P04179 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SOD2P04179 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.2■□□□□ 0.82
SOD2P04179 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SOD2P04179 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SOD2P04179 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOD2P04179 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOD2P04179 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOD2P04179 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOD2P04179 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOD2P04179 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOD2P04179 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.19■□□□□ 0.82
SOD2P04179 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.19■□□□□ 0.82
SOD2P04179 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.19■□□□□ 0.82
SOD2P04179 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SOD2P04179 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOD2P04179 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOD2P04179 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.19■□□□□ 0.82
SOD2P04179 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.18■□□□□ 0.82
SOD2P04179 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.18■□□□□ 0.82
SOD2P04179 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SOD2P04179 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 HCG4P8-203ENST00000443049 980 ntBASIC20.18■□□□□ 0.82
SOD2P04179 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.18■□□□□ 0.82
SOD2P04179 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.18■□□□□ 0.82
SOD2P04179 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.18■□□□□ 0.82
SOD2P04179 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
SOD2P04179 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.18■□□□□ 0.82
SOD2P04179 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.18■□□□□ 0.82
SOD2P04179 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.18■□□□□ 0.82
SOD2P04179 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SOD2P04179 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.18■□□□□ 0.82
SOD2P04179 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOD2P04179 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 AL023284.2-201ENST00000405850 579 ntBASIC20.17■□□□□ 0.82
SOD2P04179 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 AC034232.1-201ENST00000506026 1064 ntBASIC20.17■□□□□ 0.82
SOD2P04179 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.17■□□□□ 0.82
SOD2P04179 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SOD2P04179 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.17■□□□□ 0.82
SOD2P04179 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.17■□□□□ 0.82
SOD2P04179 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.17■□□□□ 0.82
SOD2P04179 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 487.1 ms