Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.12■■□□□ 1.29
COL1A1P02452 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
COL1A1P02452 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.12■■□□□ 1.29
COL1A1P02452 AC011558.1-201ENST00000623459 338 ntBASIC23.12■■□□□ 1.29
COL1A1P02452 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
COL1A1P02452 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A1P02452 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.12■■□□□ 1.29
COL1A1P02452 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A1P02452 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
COL1A1P02452 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.12■■□□□ 1.29
COL1A1P02452 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.12■■□□□ 1.29
COL1A1P02452 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A1P02452 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.12■■□□□ 1.29
COL1A1P02452 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.12■■□□□ 1.29
COL1A1P02452 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.12■■□□□ 1.29
COL1A1P02452 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.11■■□□□ 1.29
COL1A1P02452 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.11■■□□□ 1.29
COL1A1P02452 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 TSPY21P-201ENST00000433481 731 ntBASIC23.11■■□□□ 1.29
COL1A1P02452 KRT18P38-201ENST00000449496 1282 ntBASIC23.11■■□□□ 1.29
COL1A1P02452 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.11■■□□□ 1.29
COL1A1P02452 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.11■■□□□ 1.29
COL1A1P02452 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.11■■□□□ 1.29
COL1A1P02452 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.11■■□□□ 1.29
COL1A1P02452 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.11■■□□□ 1.29
COL1A1P02452 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.11■■□□□ 1.29
COL1A1P02452 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.11■■□□□ 1.29
COL1A1P02452 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.11■■□□□ 1.29
COL1A1P02452 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.11■■□□□ 1.29
COL1A1P02452 AL359075.1-203ENST00000462729 1002 ntBASIC23.11■■□□□ 1.29
COL1A1P02452 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.11■■□□□ 1.29
COL1A1P02452 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.11■■□□□ 1.29
COL1A1P02452 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
COL1A1P02452 AL121894.2-201ENST00000602977 491 ntBASIC23.11■■□□□ 1.29
COL1A1P02452 AC116407.4-201ENST00000623319 1061 ntBASIC23.11■■□□□ 1.29
COL1A1P02452 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A1P02452 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
COL1A1P02452 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
COL1A1P02452 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.1■■□□□ 1.29
COL1A1P02452 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.1■■□□□ 1.29
COL1A1P02452 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A1P02452 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
COL1A1P02452 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
COL1A1P02452 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.09■■□□□ 1.29
COL1A1P02452 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 AC005332.1-201ENST00000577698 1310 ntBASIC23.09■■□□□ 1.29
COL1A1P02452 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
COL1A1P02452 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 TEX21P-204ENST00000641479 1693 ntBASIC23.09■■□□□ 1.29
COL1A1P02452 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.09■■□□□ 1.29
COL1A1P02452 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.09■■□□□ 1.29
COL1A1P02452 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.09■■□□□ 1.29
COL1A1P02452 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.09■■□□□ 1.29
COL1A1P02452 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.09■■□□□ 1.29
COL1A1P02452 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A1P02452 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A1P02452 GPAT2P1-201ENST00000444924 1672 ntBASIC23.08■■□□□ 1.29
COL1A1P02452 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A1P02452 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.08■■□□□ 1.29
COL1A1P02452 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A1P02452 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A1P02452 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A1P02452 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A1P02452 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A1P02452 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL1A1P02452 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.08■■□□□ 1.28
COL1A1P02452 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL1A1P02452 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL1A1P02452 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL1A1P02452 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL1A1P02452 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL1A1P02452 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A1P02452 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A1P02452 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.07■■□□□ 1.28
COL1A1P02452 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.07■■□□□ 1.28
COL1A1P02452 AC069148.1-201ENST00000608741 768 ntBASIC23.07■■□□□ 1.28
COL1A1P02452 CR769767.2-201ENST00000622735 460 ntBASIC23.07■■□□□ 1.28
COL1A1P02452 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms