Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
TIMP1P01033 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TIMP1P01033 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TIMP1P01033 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.73■□□□□ 0.91
TIMP1P01033 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TIMP1P01033 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.73■□□□□ 0.91
TIMP1P01033 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.73■□□□□ 0.91
TIMP1P01033 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
TIMP1P01033 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.73■□□□□ 0.91
TIMP1P01033 RNF126P1-202ENST00000569893 925 ntBASIC20.73■□□□□ 0.91
TIMP1P01033 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.73■□□□□ 0.91
TIMP1P01033 MIR3180-5-201ENST00000583743 153 ntBASIC20.73■□□□□ 0.91
TIMP1P01033 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.73■□□□□ 0.91
TIMP1P01033 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.73■□□□□ 0.91
TIMP1P01033 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
TIMP1P01033 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.73■□□□□ 0.91
TIMP1P01033 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TIMP1P01033 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TIMP1P01033 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TIMP1P01033 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP1P01033 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.72■□□□□ 0.91
TIMP1P01033 MIR3917-201ENST00000580971 93 ntBASIC20.72■□□□□ 0.91
TIMP1P01033 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.72■□□□□ 0.91
TIMP1P01033 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.72■□□□□ 0.91
TIMP1P01033 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.72■□□□□ 0.91
TIMP1P01033 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TIMP1P01033 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 AC104417.2-201ENST00000562989 1793 ntBASIC20.72■□□□□ 0.91
TIMP1P01033 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TIMP1P01033 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
TIMP1P01033 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.71■□□□□ 0.91
TIMP1P01033 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.71■□□□□ 0.91
TIMP1P01033 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.71■□□□□ 0.91
TIMP1P01033 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.71■□□□□ 0.91
TIMP1P01033 AL121912.1-201ENST00000603683 238 ntBASIC20.71■□□□□ 0.91
TIMP1P01033 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TIMP1P01033 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TIMP1P01033 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
TIMP1P01033 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
TIMP1P01033 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TIMP1P01033 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP1P01033 MRPL3P1-201ENST00000400109 1033 ntBASIC20.7■□□□□ 0.9
TIMP1P01033 MCCD1P1-208ENST00000445732 328 ntBASIC20.7■□□□□ 0.9
TIMP1P01033 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP1P01033 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP1P01033 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.7■□□□□ 0.9
TIMP1P01033 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.7■□□□□ 0.9
TIMP1P01033 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP1P01033 AC112497.1-201ENST00000624824 639 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms