Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 IRX1P1-201ENST00000438849 1838 ntBASIC19.23■□□□□ 0.67
RFPL1O75677 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL1O75677 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL1O75677 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
RFPL1O75677 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL1O75677 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFPL1O75677 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.22■□□□□ 0.67
RFPL1O75677 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.22■□□□□ 0.67
RFPL1O75677 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 KRT17P3-201ENST00000420566 1262 ntBASIC19.22■□□□□ 0.67
RFPL1O75677 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.22■□□□□ 0.67
RFPL1O75677 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.22■□□□□ 0.67
RFPL1O75677 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.22■□□□□ 0.67
RFPL1O75677 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFPL1O75677 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.22■□□□□ 0.67
RFPL1O75677 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.22■□□□□ 0.67
RFPL1O75677 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL1O75677 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RFPL1O75677 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RFPL1O75677 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.21■□□□□ 0.67
RFPL1O75677 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.21■□□□□ 0.67
RFPL1O75677 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.21■□□□□ 0.67
RFPL1O75677 AL512353.2-201ENST00000448759 1962 ntBASIC19.21■□□□□ 0.67
RFPL1O75677 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.21■□□□□ 0.67
RFPL1O75677 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.21■□□□□ 0.67
RFPL1O75677 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.21■□□□□ 0.67
RFPL1O75677 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 PNMA6B-201ENST00000538162 1200 ntBASIC19.21■□□□□ 0.67
RFPL1O75677 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.21■□□□□ 0.67
RFPL1O75677 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.21■□□□□ 0.67
RFPL1O75677 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 AC135050.7-201ENST00000624508 2218 ntBASIC19.21■□□□□ 0.67
RFPL1O75677 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RFPL1O75677 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.21■□□□□ 0.67
RFPL1O75677 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RFPL1O75677 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL1O75677 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.2■□□□□ 0.66
RFPL1O75677 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 AC092368.3-202ENST00000574180 1591 ntBASIC19.2■□□□□ 0.66
RFPL1O75677 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.2■□□□□ 0.66
RFPL1O75677 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.2■□□□□ 0.66
RFPL1O75677 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.2■□□□□ 0.66
RFPL1O75677 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.2■□□□□ 0.66
RFPL1O75677 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.2■□□□□ 0.66
RFPL1O75677 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.2■□□□□ 0.66
RFPL1O75677 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.2■□□□□ 0.66
RFPL1O75677 C1QBPP2-201ENST00000528754 825 ntBASIC19.2■□□□□ 0.66
RFPL1O75677 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RFPL1O75677 AC090164.3-201ENST00000610780 2143 ntBASIC19.2■□□□□ 0.66
RFPL1O75677 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL1O75677 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFPL1O75677 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFPL1O75677 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RFPL1O75677 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFPL1O75677 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.19■□□□□ 0.66
RFPL1O75677 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFPL1O75677 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFPL1O75677 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFPL1O75677 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFPL1O75677 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RFPL1O75677 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RFPL1O75677 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFPL1O75677 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms