Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.64■□□□□ 0.09
SSSCA1O60232 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SSSCA1O60232 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SSSCA1O60232 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 AC068880.1-201ENST00000507289 2297 ntBASIC15.63■□□□□ 0.09
SSSCA1O60232 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.63■□□□□ 0.09
SSSCA1O60232 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.63■□□□□ 0.09
SSSCA1O60232 AL162412.1-201ENST00000567129 965 ntBASIC15.63■□□□□ 0.09
SSSCA1O60232 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSSCA1O60232 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SSSCA1O60232 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SSSCA1O60232 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSSCA1O60232 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.62■□□□□ 0.09
SSSCA1O60232 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.62■□□□□ 0.09
SSSCA1O60232 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
SSSCA1O60232 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.62■□□□□ 0.09
SSSCA1O60232 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SSSCA1O60232 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.62■□□□□ 0.09
SSSCA1O60232 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.62■□□□□ 0.09
SSSCA1O60232 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.62■□□□□ 0.09
SSSCA1O60232 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.62■□□□□ 0.09
SSSCA1O60232 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.62■□□□□ 0.09
SSSCA1O60232 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SSSCA1O60232 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.62■□□□□ 0.09
SSSCA1O60232 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.62■□□□□ 0.09
SSSCA1O60232 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.62■□□□□ 0.09
SSSCA1O60232 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SSSCA1O60232 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.62■□□□□ 0.09
SSSCA1O60232 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SSSCA1O60232 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSSCA1O60232 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SSSCA1O60232 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.61■□□□□ 0.09
SSSCA1O60232 AP000997.3-201ENST00000623333 2250 ntBASIC15.61■□□□□ 0.09
SSSCA1O60232 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
SSSCA1O60232 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SSSCA1O60232 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SSSCA1O60232 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.61■□□□□ 0.09
SSSCA1O60232 KRT18P68-201ENST00000392293 1000 ntBASIC15.61■□□□□ 0.09
SSSCA1O60232 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.61■□□□□ 0.09
SSSCA1O60232 YBX1P1-201ENST00000445822 960 ntBASIC15.61■□□□□ 0.09
SSSCA1O60232 AC023632.3-201ENST00000521633 145 ntBASIC15.61■□□□□ 0.09
SSSCA1O60232 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.61■□□□□ 0.09
SSSCA1O60232 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.61■□□□□ 0.09
SSSCA1O60232 AC100791.3-201ENST00000617619 330 ntBASIC15.61■□□□□ 0.09
SSSCA1O60232 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SSSCA1O60232 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SSSCA1O60232 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.61■□□□□ 0.09
SSSCA1O60232 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.61■□□□□ 0.09
SSSCA1O60232 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.61■□□□□ 0.09
SSSCA1O60232 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SSSCA1O60232 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms