Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC087289.5-201ENST00000586076 3175 ntBASIC18.44■□□□□ 0.54
SLC28A2O43868 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC28A2O43868 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
SLC28A2O43868 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC28A2O43868 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SLC28A2O43868 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 PHGDH-210ENST00000641115 1638 ntBASIC18.43■□□□□ 0.54
SLC28A2O43868 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SLC28A2O43868 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC28A2O43868 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC28A2O43868 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC28A2O43868 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SLC28A2O43868 AC006011.2-201ENST00000621313 1158 ntBASIC18.43■□□□□ 0.54
SLC28A2O43868 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC28A2O43868 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC28A2O43868 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC28A2O43868 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC28A2O43868 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC28A2O43868 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC28A2O43868 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
SLC28A2O43868 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC28A2O43868 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC28A2O43868 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC28A2O43868 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.42■□□□□ 0.54
SLC28A2O43868 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC28A2O43868 AC010203.1-204ENST00000548782 407 ntBASIC18.42■□□□□ 0.54
SLC28A2O43868 FITM1-202ENST00000559294 800 ntBASIC18.42■□□□□ 0.54
SLC28A2O43868 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC28A2O43868 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 AC093484.2-201ENST00000580996 2166 ntBASIC18.42■□□□□ 0.54
SLC28A2O43868 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
SLC28A2O43868 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC28A2O43868 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC28A2O43868 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC28A2O43868 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC28A2O43868 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC28A2O43868 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC28A2O43868 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC28A2O43868 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC28A2O43868 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC28A2O43868 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC28A2O43868 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms