Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.17■□□□□ 0.66
LDB2O43679 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.17■□□□□ 0.66
LDB2O43679 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 AP006294.2-201ENST00000641667 209 ntBASIC19.17■□□□□ 0.66
LDB2O43679 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB2O43679 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.16■□□□□ 0.66
LDB2O43679 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LDB2O43679 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.16■□□□□ 0.66
LDB2O43679 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.16■□□□□ 0.66
LDB2O43679 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LDB2O43679 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.16■□□□□ 0.66
LDB2O43679 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB2O43679 AL135905.2-201ENST00000584934 1404 ntBASIC19.16■□□□□ 0.66
LDB2O43679 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.15■□□□□ 0.66
LDB2O43679 RCC2P6-201ENST00000526625 1557 ntBASIC19.15■□□□□ 0.66
LDB2O43679 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LDB2O43679 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.15■□□□□ 0.66
LDB2O43679 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LDB2O43679 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LDB2O43679 AC026271.3-201ENST00000571884 352 ntBASIC19.15■□□□□ 0.66
LDB2O43679 AL031985.4-201ENST00000642138 673 ntBASIC19.15■□□□□ 0.66
LDB2O43679 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.15■□□□□ 0.66
LDB2O43679 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
LDB2O43679 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.15■□□□□ 0.66
LDB2O43679 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LDB2O43679 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDB2O43679 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LDB2O43679 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LDB2O43679 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
LDB2O43679 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.14■□□□□ 0.65
LDB2O43679 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 RPS2P55-201ENST00000397318 883 ntBASIC19.14■□□□□ 0.65
LDB2O43679 AC091390.4-202ENST00000476426 537 ntBASIC19.14■□□□□ 0.65
LDB2O43679 AC107956.1-201ENST00000494359 873 ntBASIC19.14■□□□□ 0.65
LDB2O43679 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LDB2O43679 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.14■□□□□ 0.65
LDB2O43679 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.14■□□□□ 0.65
LDB2O43679 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
LDB2O43679 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDB2O43679 AC006333.2-201ENST00000607957 2099 ntBASIC19.13■□□□□ 0.65
LDB2O43679 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
LDB2O43679 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
LDB2O43679 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.13■□□□□ 0.65
LDB2O43679 FAM197Y1-201ENST00000421178 764 ntBASIC19.13■□□□□ 0.65
LDB2O43679 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 AC008040.2-201ENST00000461049 708 ntBASIC19.13■□□□□ 0.65
LDB2O43679 AC233702.5-201ENST00000584107 538 ntBASIC19.13■□□□□ 0.65
LDB2O43679 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.13■□□□□ 0.65
LDB2O43679 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.13■□□□□ 0.65
LDB2O43679 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 KRT8P11-201ENST00000409686 1436 ntBASIC19.13■□□□□ 0.65
LDB2O43679 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDB2O43679 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.13■□□□□ 0.65
LDB2O43679 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms