Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CLDN5O00501 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.23■□□□□ 0.83
CLDN5O00501 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 ECEL1P2-202ENST00000465689 757 ntBASIC20.23■□□□□ 0.83
CLDN5O00501 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.23■□□□□ 0.83
CLDN5O00501 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CLDN5O00501 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.23■□□□□ 0.83
CLDN5O00501 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CLDN5O00501 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN5O00501 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN5O00501 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLDN5O00501 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CLDN5O00501 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN5O00501 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.23■□□□□ 0.83
CLDN5O00501 TEX21P-204ENST00000641479 1693 ntBASIC20.22■□□□□ 0.83
CLDN5O00501 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLDN5O00501 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN5O00501 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN5O00501 TSPY14P-201ENST00000303979 915 ntBASIC20.22■□□□□ 0.83
CLDN5O00501 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN5O00501 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN5O00501 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN5O00501 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLDN5O00501 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN5O00501 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CLDN5O00501 AL032819.2-201ENST00000624543 2162 ntBASIC20.21■□□□□ 0.83
CLDN5O00501 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN5O00501 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN5O00501 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN5O00501 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN5O00501 PRSS44-201ENST00000515154 1146 ntBASIC20.21■□□□□ 0.83
CLDN5O00501 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.21■□□□□ 0.83
CLDN5O00501 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN5O00501 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLDN5O00501 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN5O00501 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN5O00501 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 EGLN1P1-201ENST00000531623 762 ntBASIC20.2■□□□□ 0.82
CLDN5O00501 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLDN5O00501 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLDN5O00501 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLDN5O00501 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLDN5O00501 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN5O00501 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLDN5O00501 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN5O00501 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CLDN5O00501 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CLDN5O00501 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CLDN5O00501 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 TSPY21P-201ENST00000433481 731 ntBASIC20.19■□□□□ 0.82
CLDN5O00501 KRT18P21-201ENST00000515767 1272 ntBASIC20.19■□□□□ 0.82
CLDN5O00501 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.19■□□□□ 0.82
CLDN5O00501 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CLDN5O00501 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN5O00501 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN5O00501 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN5O00501 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN5O00501 KRT18P22-201ENST00000402024 1347 ntBASIC20.19■□□□□ 0.82
CLDN5O00501 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN5O00501 AC116562.4-201ENST00000641316 2276 ntBASIC20.19■□□□□ 0.82
CLDN5O00501 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms