Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC188H7C350 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC188H7C350 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC188H7C350 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC188H7C350 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC188H7C350 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC188H7C350 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC188H7C350 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC188H7C350 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 AC087623.3-201ENST00000607047 1098 ntBASIC19.92■□□□□ 0.78
CCDC188H7C350 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC188H7C350 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC188H7C350 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC188H7C350 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC188H7C350 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 AL133373.2-201ENST00000623187 2828 ntBASIC19.91■□□□□ 0.78
CCDC188H7C350 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC188H7C350 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC188H7C350 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC188H7C350 AC133552.2-202ENST00000575694 574 ntBASIC19.91■□□□□ 0.78
CCDC188H7C350 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC188H7C350 RAP2CP1-201ENST00000605103 478 ntBASIC19.91■□□□□ 0.78
CCDC188H7C350 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC188H7C350 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC188H7C350 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC188H7C350 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC188H7C350 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC188H7C350 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC188H7C350 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC188H7C350 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC188H7C350 AC005181.1-201ENST00000604782 1256 ntBASIC19.9■□□□□ 0.78
CCDC188H7C350 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC188H7C350 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC188H7C350 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC188H7C350 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC188H7C350 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC188H7C350 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC188H7C350 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC188H7C350 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC188H7C350 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC188H7C350 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC188H7C350 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
CCDC188H7C350 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC188H7C350 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC188H7C350 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC188H7C350 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC188H7C350 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms