Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 TCF3P1-201ENST00000423021 1937 ntBASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 LBH-205ENST00000407930 756 ntTSL 2 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 OR7E47P-201ENST00000546390 1422 ntBASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CHKB-CPT1BH3BT56 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CHKB-CPT1BH3BT56 MKRN4P-201ENST00000444706 1521 ntBASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms