Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SRRM4A7MD48 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SRRM4A7MD48 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRRM4A7MD48 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.43■□□□□ 0.06
SRRM4A7MD48 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRRM4A7MD48 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SRRM4A7MD48 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.43■□□□□ 0.06
SRRM4A7MD48 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRRM4A7MD48 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 C1QL1P1-201ENST00000568105 661 ntBASIC15.42■□□□□ 0.06
SRRM4A7MD48 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 AC004264.1-201ENST00000608354 794 ntBASIC15.42■□□□□ 0.06
SRRM4A7MD48 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SRRM4A7MD48 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRRM4A7MD48 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 AC138932.1-201ENST00000534164 6830 ntBASIC15.41■□□□□ 0.06
SRRM4A7MD48 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 FEM1AP3-201ENST00000403722 1741 ntBASIC15.41■□□□□ 0.06
SRRM4A7MD48 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRRM4A7MD48 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.41■□□□□ 0.06
SRRM4A7MD48 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 AL160286.2-201ENST00000567150 934 ntBASIC15.4■□□□□ 0.06
SRRM4A7MD48 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRRM4A7MD48 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRRM4A7MD48 AL138781.2-201ENST00000617896 1843 ntBASIC15.4■□□□□ 0.06
SRRM4A7MD48 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms