Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.1■□□□□ 0.33
TVP23AA6NH52 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TVP23AA6NH52 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 TUBB8P6-201ENST00000436895 1288 ntBASIC17.09■□□□□ 0.33
TVP23AA6NH52 KRT18P16-201ENST00000510337 1294 ntBASIC17.09■□□□□ 0.33
TVP23AA6NH52 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 AL121829.2-201ENST00000620908 328 ntBASIC17.09■□□□□ 0.33
TVP23AA6NH52 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 AC133041.1-202ENST00000642053 222 ntBASIC17.09■□□□□ 0.33
TVP23AA6NH52 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TVP23AA6NH52 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TVP23AA6NH52 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TVP23AA6NH52 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TVP23AA6NH52 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TVP23AA6NH52 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TVP23AA6NH52 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TVP23AA6NH52 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TVP23AA6NH52 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TVP23AA6NH52 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 AC104771.1-201ENST00000603335 964 ntBASIC17.08■□□□□ 0.32
TVP23AA6NH52 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TVP23AA6NH52 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.08■□□□□ 0.32
TVP23AA6NH52 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 AC090340.1-201ENST00000620778 4980 ntBASIC17.07■□□□□ 0.32
TVP23AA6NH52 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TVP23AA6NH52 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms