Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 KRASP1-201ENST00000407852 552 ntBASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 FEM1AP3-201ENST00000403722 1741 ntBASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM49BA6NDI0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM49BA6NDI0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 AL160286.2-201ENST00000567150 934 ntBASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 AC004264.1-201ENST00000608354 794 ntBASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms