Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.81■■□□□ 1.08
SYCE3A1L190 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SYCE3A1L190 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.81■■□□□ 1.08
SYCE3A1L190 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYCE3A1L190 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SYCE3A1L190 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE3A1L190 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 AC012313.1-201ENST00000593393 3059 ntBASIC21.8■■□□□ 1.08
SYCE3A1L190 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SYCE3A1L190 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.8■■□□□ 1.08
SYCE3A1L190 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.8■■□□□ 1.08
SYCE3A1L190 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.8■■□□□ 1.08
SYCE3A1L190 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE3A1L190 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE3A1L190 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.8■■□□□ 1.08
SYCE3A1L190 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.8■■□□□ 1.08
SYCE3A1L190 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYCE3A1L190 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE3A1L190 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCE3A1L190 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE3A1L190 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE3A1L190 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SYCE3A1L190 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.79■■□□□ 1.08
SYCE3A1L190 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SYCE3A1L190 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE3A1L190 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.79■■□□□ 1.08
SYCE3A1L190 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE3A1L190 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SYCE3A1L190 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SYCE3A1L190 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.79■■□□□ 1.08
SYCE3A1L190 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.79■■□□□ 1.08
SYCE3A1L190 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE3A1L190 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYCE3A1L190 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.78■■□□□ 1.08
SYCE3A1L190 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SYCE3A1L190 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.78■■□□□ 1.08
SYCE3A1L190 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.78■■□□□ 1.08
SYCE3A1L190 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.78■■□□□ 1.08
SYCE3A1L190 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SYCE3A1L190 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYCE3A1L190 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.77■■□□□ 1.08
SYCE3A1L190 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.77■■□□□ 1.08
SYCE3A1L190 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SYCE3A1L190 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.77■■□□□ 1.08
SYCE3A1L190 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms