Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC016769.1-201ENST00000409132 1010 ntBASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 LSM12P1-201ENST00000411836 588 ntBASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC007322.1-201ENST00000426983 750 ntBASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC005829.2-201ENST00000571422 1056 ntBASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC011767.1-201ENST00000617410 1153 ntBASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRBV6-5A0A0K0K1A5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC090340.1-201ENST00000620778 4980 ntBASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC005332.8-201ENST00000622750 2735 ntBASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 HCG11-201ENST00000411553 5696 ntBASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AP006587.1-201ENST00000534129 1502 ntBASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 RAP2CP1-201ENST00000605103 478 ntBASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-5A0A0K0K1A5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms