Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV12-1A0A0B4J245 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 AC079140.4-201ENST00000507448 529 ntBASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV12-1A0A0B4J245 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV12-1A0A0B4J245 RBM17P2-201ENST00000616397 1405 ntBASIC13.46□□□□□ -0.26
TRAV12-1A0A0B4J245 AC141586.5-201ENST00000624546 2050 ntBASIC13.46□□□□□ -0.26
TRAV12-1A0A0B4J245 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV12-1A0A0B4J245 FER1L4-210ENST00000615531 5998 ntBASIC13.46□□□□□ -0.26
TRAV12-1A0A0B4J245 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV12-1A0A0B4J245 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 SLC25A6P5-201ENST00000435663 894 ntBASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 SLC7A5P2-201ENST00000553010 536 ntBASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 AC126763.1-201ENST00000552015 2118 ntBASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV12-1A0A0B4J245 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 CCDC92B-201ENST00000575506 885 ntBASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 MIR4767-201ENST00000582827 78 ntBASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV12-1A0A0B4J245 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms