Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 AP000523.1-201ENST00000398242 1049 ntBASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 AL023973.1-201ENST00000624619 620 ntBASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV19A0A0A6YYK7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 HOMER2P1-201ENST00000455653 964 ntBASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV19A0A0A6YYK7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 MYC-208ENST00000641036 567 ntBASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV19A0A0A6YYK7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms