Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC004264.1-201ENST00000608354 794 ntBASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-8A0A0A6YYG3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 IRX1P1-201ENST00000438849 1838 ntBASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AC006333.2-201ENST00000607957 2099 ntBASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-8A0A0A6YYG3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 NBPF21P-201ENST00000425093 1451 ntBASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 HLA-L-209ENST00000420110 1011 ntBASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 KRT17P3-201ENST00000420566 1262 ntBASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-8A0A0A6YYG3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms