Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 SNORD113-5-201ENST00000607261 78 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AL591926.1-201ENST00000620542 217 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AC089999.3-201ENST00000622440 577 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 AP001052.1-201ENST00000626421 99 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USB1Q9BQ65 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
USB1Q9BQ65 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.75□□□□□ -1.49
USB1Q9BQ65 RACGAP1P-201ENST00000550663 1879 ntBASIC5.75□□□□□ -1.49
USB1Q9BQ65 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USB1Q9BQ65 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
USB1Q9BQ65 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
USB1Q9BQ65 Y_RNA.33-201ENST00000362591 102 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 RNU6-1301P-201ENST00000362724 104 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 RNU6-923P-201ENST00000364753 107 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 RNU6-384P-201ENST00000364900 104 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 RN7SKP187-201ENST00000365536 330 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 SNORA22C-201ENST00000384614 134 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 AL358453.1-201ENST00000422522 250 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 AP006222.1-205ENST00000450734 457 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 AC023141.9-201ENST00000458734 412 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 AC010326.1-201ENST00000462726 602 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 RPL23AP45-201ENST00000476406 468 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 RNU6-927P-201ENST00000516199 100 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 H3F3AP1-201ENST00000559984 334 ntBASIC5.74□□□□□ -1.49
USB1Q9BQ65 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
USB1Q9BQ65 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
USB1Q9BQ65 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USB1Q9BQ65 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
USB1Q9BQ65 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
USB1Q9BQ65 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
USB1Q9BQ65 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USB1Q9BQ65 Y_RNA.275-201ENST00000364726 110 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 AC116036.1-201ENST00000412199 367 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 RPS20P1-201ENST00000434853 354 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 KNOP1P3-201ENST00000446933 426 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 RPS26P21-201ENST00000475397 348 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 RN7SL741P-201ENST00000482473 289 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 RN7SL362P-201ENST00000494228 267 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 SRGNP1-201ENST00000603392 451 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USB1Q9BQ65 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
USB1Q9BQ65 NCAPGP1-201ENST00000505112 1814 ntBASIC5.73□□□□□ -1.49
USB1Q9BQ65 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USB1Q9BQ65 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
USB1Q9BQ65 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
USB1Q9BQ65 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 CASC19-228ENST00000641414 1684 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 RNA5SP188-201ENST00000362916 129 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 RNU6-512P-201ENST00000364438 103 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 Y_RNA.286-201ENST00000364813 102 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 RNU1-84P-201ENST00000365447 164 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 Y_RNA.418-201ENST00000384029 102 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 Y_RNA.569-201ENST00000384749 103 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 Y_RNA.623-201ENST00000411128 95 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 CYCSP52-201ENST00000422857 310 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 RPS27AP12-201ENST00000429552 465 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms