RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 AEBP2Q6ZN18 517 aaPredicted RBP14.04□□□□□ -0.16
CCDC30-212ENST00000507855 CHIC1Q5VXU3 224 aa13.66□□□□□ -0.22
CCDC30-212ENST00000507855 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
CCDC30-212ENST00000507855 SENP3Q9H4L4 574 aaPredicted RBP11.59□□□□□ -0.55
CCDC30-212ENST00000507855 PLPPR3Q6T4P5 718 aa11.08□□□□□ -0.64
CCDC30-212ENST00000507855 FOXD1Q16676 465 aa10.94□□□□□ -0.66
CCDC30-212ENST00000507855 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
CCDC30-212ENST00000507855 ADRA2BP18089 450 aa10.74□□□□□ -0.69
CCDC30-212ENST00000507855 PIAS4Q8N2W9 510 aaPredicted RBP10.28□□□□□ -0.76
CCDC30-212ENST00000507855 POTEDQ86YR6 584 aa10.02□□□□□ -0.81
CCDC30-212ENST00000507855 KCNA4P22459 653 aa9.97□□□□□ -0.81
CCDC30-212ENST00000507855 PPP4R3CPQ6ZMV5 832 aa9.88□□□□□ -0.83
CCDC30-212ENST00000507855 MSH5O43196 834 aa9.77□□□□□ -0.85
CCDC30-212ENST00000507855 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
CCDC30-212ENST00000507855 NPM3O75607 178 aaKnown RBP9.58□□□□□ -0.88
CCDC30-212ENST00000507855 EHMT2Q96KQ7 1210 aa9.47□□□□□ -0.89
CCDC30-212ENST00000507855 CNKSR2Q8WXI2 1034 aa9.47□□□□□ -0.89
CCDC30-212ENST00000507855 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.89
CCDC30-212ENST00000507855 SCAF1Q9H7N4 1312 aaKnown RBP9.45□□□□□ -0.9
CCDC30-212ENST00000507855 SLC4A1APQ9BWU0 796 aaKnown RBP9.39□□□□□ -0.91
CCDC30-212ENST00000507855 DMRT2Q9Y5R5 561 aa9.34□□□□□ -0.91
CCDC30-212ENST00000507855 ZBTB22O15209 634 aa9.27□□□□□ -0.93
CCDC30-212ENST00000507855 CSRNP3Q8WYN3 585 aa9.26□□□□□ -0.93
CCDC30-212ENST00000507855 RNF216Q9NWF9 866 aaPredicted RBP9.24□□□□□ -0.93
CCDC30-212ENST00000507855 HOXD11P31277 338 aaPredicted RBP9.2□□□□□ -0.94
CCDC30-212ENST00000507855 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
CCDC30-212ENST00000507855 DNAJC5BQ9UF47 199 aa9.04□□□□□ -0.96
CCDC30-212ENST00000507855 DCAF8L1A6NGE4 600 aa9□□□□□ -0.97
CCDC30-212ENST00000507855 FOXD4L1Q9NU39 408 aa8.95□□□□□ -0.98
CCDC30-212ENST00000507855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC30-212ENST00000507855 ATF5Q9Y2D1 282 aaPredicted RBP8.75□□□□□ -1.01
CCDC30-212ENST00000507855 U3KPZ7 1027 aaPredicted RBP8.75□□□□□ -1.01
CCDC30-212ENST00000507855 MYCNP04198 464 aaPredicted RBP8.7□□□□□ -1.02
CCDC30-212ENST00000507855 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
CCDC30-212ENST00000507855 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
CCDC30-212ENST00000507855 ATXN8OSP0DMR3 200 aa8.5□□□□□ -1.05
CCDC30-212ENST00000507855 SAMD1Q6SPF0 538 aaPredicted RBP8.44□□□□□ -1.06
CCDC30-212ENST00000507855 TRHP20396 242 aaPredicted RBP8.4□□□□□ -1.06
CCDC30-212ENST00000507855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.39□□□□□ -1.07
CCDC30-212ENST00000507855 HNRNPUL2Q1KMD3 747 aaKnown RBP8.39□□□□□ -1.07
CCDC30-212ENST00000507855 ZNF219Q9P2Y4 722 aaPredicted RBP8.39□□□□□ -1.07
CCDC30-212ENST00000507855 CAPN15O75808 1086 aa8.35□□□□□ -1.07
CCDC30-212ENST00000507855 ABCB7O75027 752 aa8.33□□□□□ -1.08
CCDC30-212ENST00000507855 C1QBPQ07021 282 aaKnown RBP8.31□□□□□ -1.08
CCDC30-212ENST00000507855 MKRN4PQ13434 485 aaPredicted RBP8.31□□□□□ -1.08
CCDC30-212ENST00000507855 POLA2Q14181 598 aa8.31□□□□□ -1.08
CCDC30-212ENST00000507855 FKBP8Q14318 412 aa8.31□□□□□ -1.08
CCDC30-212ENST00000507855 DSG3P32926 999 aa8.21□□□□□ -1.09
CCDC30-212ENST00000507855 CACNB1Q02641 598 aaPredicted RBP8.16□□□□□ -1.1
CCDC30-212ENST00000507855 APLP2Q06481 763 aa8.16□□□□□ -1.1
CCDC30-212ENST00000507855 SPDYE4A6NLX3 237 aa8.07□□□□□ -1.12
CCDC30-212ENST00000507855 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
CCDC30-212ENST00000507855 FBLN2P98095 1184 aa8.02□□□□□ -1.13
CCDC30-212ENST00000507855 RTN4Q9NQC3 1192 aaKnown RBP7.95□□□□□ -1.14
CCDC30-212ENST00000507855 PROM2Q8N271 834 aa7.95□□□□□ -1.14
CCDC30-212ENST00000507855 ZNF692Q9BU19 519 aaPredicted RBP7.9□□□□□ -1.15
CCDC30-212ENST00000507855 ZBTB12Q9Y330 459 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-212ENST00000507855 SSUH2Q9Y2M2 353 aa7.86□□□□□ -1.15
CCDC30-212ENST00000507855 PABPN1Q86U42 306 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCDC30-212ENST00000507855 SPDYE2BA6NHP3 402 aa7.81□□□□□ -1.16
CCDC30-212ENST00000507855 SPDYE6P0CI01 402 aa7.81□□□□□ -1.16
CCDC30-212ENST00000507855 SPDYE2Q495Y8 402 aa7.81□□□□□ -1.16
CCDC30-212ENST00000507855 IFNLR1Q8IU57 520 aaPredicted RBP7.8□□□□□ -1.16
CCDC30-212ENST00000507855 VASPP50552 380 aaPredicted RBP7.79□□□□□ -1.16
CCDC30-212ENST00000507855 FBXO3Q9UK99 471 aa7.72□□□□□ -1.17
CCDC30-212ENST00000507855 AMER1Q5JTC6 1135 aaPredicted RBP7.69□□□□□ -1.18
CCDC30-212ENST00000507855 REM2Q8IYK8 340 aaPredicted RBP7.66□□□□□ -1.18
CCDC30-212ENST00000507855 CLEC11AQ9Y240 323 aa7.64□□□□□ -1.19
CCDC30-212ENST00000507855 MIER1Q8N108 512 aa7.63□□□□□ -1.19
CCDC30-212ENST00000507855 AKT1S1Q96B36 256 aa7.61□□□□□ -1.19
CCDC30-212ENST00000507855 PITPNM1O00562 1244 aa7.61□□□□□ -1.19
CCDC30-212ENST00000507855 PKD2Q13563 968 aa7.61□□□□□ -1.19
CCDC30-212ENST00000507855 PLCD3Q8N3E9 789 aa7.6□□□□□ -1.19
CCDC30-212ENST00000507855 RBM42Q9BTD8 480 aaKnown RBP7.59□□□□□ -1.19
CCDC30-212ENST00000507855 KLHL34Q8N239 644 aa7.58□□□□□ -1.2
CCDC30-212ENST00000507855 STAG3Q9UJ98 1225 aa7.56□□□□□ -1.2
CCDC30-212ENST00000507855 CHADLQ6NUI6 762 aa7.54□□□□□ -1.2
CCDC30-212ENST00000507855 CREBZFQ9NS37 354 aa7.54□□□□□ -1.2
CCDC30-212ENST00000507855 MNX1P50219 401 aaPredicted RBP7.54□□□□□ -1.2
CCDC30-212ENST00000507855 POTEHQ6S545 545 aa7.53□□□□□ -1.2
CCDC30-212ENST00000507855 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
CCDC30-212ENST00000507855 PRR29P0C7W0 189 aa7.51□□□□□ -1.21
CCDC30-212ENST00000507855 SPOCK2Q92563 424 aa7.5□□□□□ -1.21
CCDC30-212ENST00000507855 RGL2O15211 777 aa7.46□□□□□ -1.22
CCDC30-212ENST00000507855 NUBP1P53384 320 aa7.46□□□□□ -1.22
CCDC30-212ENST00000507855 RASEFQ8IZ41 740 aa7.44□□□□□ -1.22
CCDC30-212ENST00000507855 CIZ1Q9ULV3 898 aaPredicted RBP7.44□□□□□ -1.22
CCDC30-212ENST00000507855 NPM1P06748 294 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCDC30-212ENST00000507855 DCAF8L2P0C7V8 631 aa7.42□□□□□ -1.22
CCDC30-212ENST00000507855 RNF25Q96BH1 459 aaPredicted RBP7.42□□□□□ -1.22
CCDC30-212ENST00000507855 ECM2O94769 699 aaPredicted RBP7.41□□□□□ -1.22
CCDC30-212ENST00000507855 CHRDL2Q6WN34 429 aa7.39□□□□□ -1.23
CCDC30-212ENST00000507855 PRKAR2AP13861 404 aaKnown RBP7.38□□□□□ -1.23
CCDC30-212ENST00000507855 PIP4P2Q8N4L2 257 aa7.38□□□□□ -1.23
CCDC30-212ENST00000507855 FXR2P51116 673 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCDC30-212ENST00000507855 DCAF8Q5TAQ9 597 aa7.35□□□□□ -1.23
CCDC30-212ENST00000507855 FARP1Q9Y4F1 1045 aaPredicted RBP7.35□□□□□ -1.23
CCDC30-212ENST00000507855 PLEKHG5O94827 1062 aa7.34□□□□□ -1.23
CCDC30-212ENST00000507855 TSPYL2Q9H2G4 693 aaPredicted RBP7.33□□□□□ -1.24
CCDC30-212ENST00000507855 PYGBP11216 843 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms