RNA–Protein interactions for RNA: ENST00000559984.2

H3F3AP1-201, Transcript of H3 histone family member 3A pseudogene 1, humanhuman

BASIC

Gene H3F3AP1, Length 334 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP1-201ENST00000559984 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
H3F3AP1-201ENST00000559984 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
H3F3AP1-201ENST00000559984 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
H3F3AP1-201ENST00000559984 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
H3F3AP1-201ENST00000559984 FOXD1Q16676 465 aa12.89□□□□□ -0.35
H3F3AP1-201ENST00000559984 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
H3F3AP1-201ENST00000559984 MSH5O43196 834 aa12.14□□□□□ -0.47
H3F3AP1-201ENST00000559984 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
H3F3AP1-201ENST00000559984 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
H3F3AP1-201ENST00000559984 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
H3F3AP1-201ENST00000559984 ADRA2BP18089 450 aa11.9□□□□□ -0.5
H3F3AP1-201ENST00000559984 SCAF1Q9H7N4 1312 aaKnown RBP10.96□□□□□ -0.65
H3F3AP1-201ENST00000559984 DMRT2Q9Y5R5 561 aa10.96□□□□□ -0.65
H3F3AP1-201ENST00000559984 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
H3F3AP1-201ENST00000559984 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
H3F3AP1-201ENST00000559984 HOXD11P31277 338 aaPredicted RBP10.53□□□□□ -0.72
H3F3AP1-201ENST00000559984 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
H3F3AP1-201ENST00000559984 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.73
H3F3AP1-201ENST00000559984 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
H3F3AP1-201ENST00000559984 RNF216Q9NWF9 866 aaPredicted RBP10.42□□□□□ -0.74
H3F3AP1-201ENST00000559984 RNF39Q9H2S5 420 aa10.33□□□□□ -0.76
H3F3AP1-201ENST00000559984 DNAJC5BQ9UF47 199 aa10.24□□□□□ -0.77
H3F3AP1-201ENST00000559984 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
H3F3AP1-201ENST00000559984 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
H3F3AP1-201ENST00000559984 NPM3O75607 178 aaKnown RBP10.04□□□□□ -0.8
H3F3AP1-201ENST00000559984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.99□□□□□ -0.81
H3F3AP1-201ENST00000559984 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
H3F3AP1-201ENST00000559984 KCNA4P22459 653 aa9.75□□□□□ -0.85
H3F3AP1-201ENST00000559984 SPINK5Q9NQ38 1064 aaPredicted RBP9.65□□□□□ -0.86
H3F3AP1-201ENST00000559984 CAPN15O75808 1086 aa9.64□□□□□ -0.87
H3F3AP1-201ENST00000559984 DSG3P32926 999 aa9.63□□□□□ -0.87
H3F3AP1-201ENST00000559984 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
H3F3AP1-201ENST00000559984 APLP2Q06481 763 aa9.55□□□□□ -0.88
H3F3AP1-201ENST00000559984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
H3F3AP1-201ENST00000559984 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
H3F3AP1-201ENST00000559984 ZNF219Q9P2Y4 722 aaPredicted RBP9.49□□□□□ -0.89
H3F3AP1-201ENST00000559984 TRHP20396 242 aaPredicted RBP9.46□□□□□ -0.9
H3F3AP1-201ENST00000559984 SAMD1Q6SPF0 538 aaPredicted RBP9.44□□□□□ -0.9
H3F3AP1-201ENST00000559984 ABCB7O75027 752 aa9.39□□□□□ -0.91
H3F3AP1-201ENST00000559984 POTEHQ6S545 545 aa9.38□□□□□ -0.91
H3F3AP1-201ENST00000559984 MYCNP04198 464 aaPredicted RBP9.32□□□□□ -0.92
H3F3AP1-201ENST00000559984 RBM42Q9BTD8 480 aaKnown RBP9.24□□□□□ -0.93
H3F3AP1-201ENST00000559984 POLA2Q14181 598 aa9.19□□□□□ -0.94
H3F3AP1-201ENST00000559984 SLC4A1APQ9BWU0 796 aaKnown RBP9.19□□□□□ -0.94
H3F3AP1-201ENST00000559984 FOXD4L1Q9NU39 408 aa9.16□□□□□ -0.94
H3F3AP1-201ENST00000559984 ATF5Q9Y2D1 282 aaPredicted RBP9.06□□□□□ -0.96
H3F3AP1-201ENST00000559984 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
H3F3AP1-201ENST00000559984 CHRDL2Q6WN34 429 aa9.03□□□□□ -0.96
H3F3AP1-201ENST00000559984 AKT1S1Q96B36 256 aa8.99□□□□□ -0.97
H3F3AP1-201ENST00000559984 ZBTB22O15209 634 aa8.94□□□□□ -0.98
H3F3AP1-201ENST00000559984 ATXN8OSP0DMR3 200 aa8.92□□□□□ -0.98
H3F3AP1-201ENST00000559984 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
H3F3AP1-201ENST00000559984 REM2Q8IYK8 340 aaPredicted RBP8.88□□□□□ -0.99
H3F3AP1-201ENST00000559984 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
H3F3AP1-201ENST00000559984 PITPNM1O00562 1244 aa8.77□□□□□ -1.01
H3F3AP1-201ENST00000559984 FBLN2P98095 1184 aa8.76□□□□□ -1.01
H3F3AP1-201ENST00000559984 SPDYE2BA6NHP3 402 aa8.75□□□□□ -1.01
H3F3AP1-201ENST00000559984 SPDYE6P0CI01 402 aa8.75□□□□□ -1.01
H3F3AP1-201ENST00000559984 SPDYE2Q495Y8 402 aa8.75□□□□□ -1.01
H3F3AP1-201ENST00000559984 SP7Q8TDD2 431 aaPredicted RBP8.75□□□□□ -1.01
H3F3AP1-201ENST00000559984 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
H3F3AP1-201ENST00000559984 HAX1O00165 279 aa8.65□□□□□ -1.02
H3F3AP1-201ENST00000559984 MKRN4PQ13434 485 aaPredicted RBP8.65□□□□□ -1.02
H3F3AP1-201ENST00000559984 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
H3F3AP1-201ENST00000559984 SSUH2Q9Y2M2 353 aa8.62□□□□□ -1.03
H3F3AP1-201ENST00000559984 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
H3F3AP1-201ENST00000559984 CLEC11AQ9Y240 323 aa8.56□□□□□ -1.04
H3F3AP1-201ENST00000559984 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
H3F3AP1-201ENST00000559984 EVX2Q03828 476 aa8.52□□□□□ -1.05
H3F3AP1-201ENST00000559984 PABPN1Q86U42 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
H3F3AP1-201ENST00000559984 C19orf67A6NJJ6 358 aa8.46□□□□□ -1.06
H3F3AP1-201ENST00000559984 CSRNP3Q8WYN3 585 aa8.46□□□□□ -1.06
H3F3AP1-201ENST00000559984 PRR29P0C7W0 189 aa8.43□□□□□ -1.06
H3F3AP1-201ENST00000559984 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
H3F3AP1-201ENST00000559984 EHMT2Q96KQ7 1210 aa8.37□□□□□ -1.07
H3F3AP1-201ENST00000559984 GABBR2O75899 941 aa8.35□□□□□ -1.07
H3F3AP1-201ENST00000559984 FARP1Q9Y4F1 1045 aaPredicted RBP8.3□□□□□ -1.08
H3F3AP1-201ENST00000559984 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
H3F3AP1-201ENST00000559984 CLCN6P51797 869 aa8.26□□□□□ -1.09
H3F3AP1-201ENST00000559984 STAG3Q9UJ98 1225 aa8.25□□□□□ -1.09
H3F3AP1-201ENST00000559984 SPDYE4A6NLX3 237 aa8.2□□□□□ -1.1
H3F3AP1-201ENST00000559984 LHX8Q68G74 356 aa8.2□□□□□ -1.1
H3F3AP1-201ENST00000559984 CREBZFQ9NS37 354 aa8.19□□□□□ -1.1
H3F3AP1-201ENST00000559984 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
H3F3AP1-201ENST00000559984 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
H3F3AP1-201ENST00000559984 ZRANB1Q9UGI0 708 aa8.14□□□□□ -1.11
H3F3AP1-201ENST00000559984 DCBLD2Q96PD2 775 aa8.11□□□□□ -1.11
H3F3AP1-201ENST00000559984 PAK3O75914 559 aaPredicted RBP8.08□□□□□ -1.12
H3F3AP1-201ENST00000559984 NPM1P06748 294 aaKnown RBP eCLIP8.07□□□□□ -1.12
H3F3AP1-201ENST00000559984 MNX1P50219 401 aaPredicted RBP8.05□□□□□ -1.12
H3F3AP1-201ENST00000559984 GALR2O43603 387 aaPredicted RBP8.04□□□□□ -1.12
H3F3AP1-201ENST00000559984 PROM2Q8N271 834 aa8.02□□□□□ -1.13
H3F3AP1-201ENST00000559984 PHF12Q96QT6 1004 aa8□□□□□ -1.13
H3F3AP1-201ENST00000559984 MS4A3Q96HJ5 214 aa7.91□□□□□ -1.14
H3F3AP1-201ENST00000559984 ASTLQ6HA08 431 aaPredicted RBP7.89□□□□□ -1.15
H3F3AP1-201ENST00000559984 POTEB2H3BUK9 544 aa7.88□□□□□ -1.15
H3F3AP1-201ENST00000559984 PELP1Q8IZL8 1130 aaKnown RBP7.88□□□□□ -1.15
H3F3AP1-201ENST00000559984 OTUD5Q96G74 571 aa7.88□□□□□ -1.15
H3F3AP1-201ENST00000559984 PLEKHG5O94827 1062 aa7.87□□□□□ -1.15
H3F3AP1-201ENST00000559984 TSPYL2Q9H2G4 693 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms