RNA–Protein interactions for RNA: ENST00000390453.1

TRAV24-201, Transcript of T cell receptor alpha variable 24, humanhuman

APPRIS P1 BASIC

Gene TRAV24, Length 343 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24-201ENST00000390453 CHIC1Q5VXU3 224 aa12.41□□□□□ -0.42
TRAV24-201ENST00000390453 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
TRAV24-201ENST00000390453 PHF23Q9BUL5 403 aaPredicted RBP10.9□□□□□ -0.66
TRAV24-201ENST00000390453 PLPPR3Q6T4P5 718 aa10.39□□□□□ -0.75
TRAV24-201ENST00000390453 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
TRAV24-201ENST00000390453 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
TRAV24-201ENST00000390453 KCNA4P22459 653 aa9.61□□□□□ -0.87
TRAV24-201ENST00000390453 ADRA2BP18089 450 aa9.54□□□□□ -0.88
TRAV24-201ENST00000390453 PPP6R1Q9UPN7 881 aa9.39□□□□□ -0.91
TRAV24-201ENST00000390453 CSRNP3Q8WYN3 585 aa9.33□□□□□ -0.92
TRAV24-201ENST00000390453 FOXD1Q16676 465 aa9.31□□□□□ -0.92
TRAV24-201ENST00000390453 SLC4A1APQ9BWU0 796 aaKnown RBP9.3□□□□□ -0.92
TRAV24-201ENST00000390453 NCBP3Q53F19 620 aaKnown RBP9.2□□□□□ -0.94
TRAV24-201ENST00000390453 PPP4R3CPQ6ZMV5 832 aa9.17□□□□□ -0.94
TRAV24-201ENST00000390453 NPM3O75607 178 aaKnown RBP8.97□□□□□ -0.97
TRAV24-201ENST00000390453 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
TRAV24-201ENST00000390453 PIAS4Q8N2W9 510 aaPredicted RBP8.92□□□□□ -0.98
TRAV24-201ENST00000390453 CNKSR2Q8WXI2 1034 aa8.84□□□□□ -0.99
TRAV24-201ENST00000390453 ZBTB22O15209 634 aa8.82□□□□□ -1
TRAV24-201ENST00000390453 AMER1Q5JTC6 1135 aaPredicted RBP8.82□□□□□ -1
TRAV24-201ENST00000390453 DNAJC5BQ9UF47 199 aa8.82□□□□□ -1
TRAV24-201ENST00000390453 SCAF1Q9H7N4 1312 aaKnown RBP8.79□□□□□ -1
TRAV24-201ENST00000390453 FOXD4L1Q9NU39 408 aa8.75□□□□□ -1.01
TRAV24-201ENST00000390453 RTN4Q9NQC3 1192 aaKnown RBP8.69□□□□□ -1.02
TRAV24-201ENST00000390453 RNF216Q9NWF9 866 aaPredicted RBP8.53□□□□□ -1.04
TRAV24-201ENST00000390453 ATXN8OSP0DMR3 200 aa8.48□□□□□ -1.05
TRAV24-201ENST00000390453 MSH5O43196 834 aa8.45□□□□□ -1.06
TRAV24-201ENST00000390453 FKBP8Q14318 412 aa8.38□□□□□ -1.07
TRAV24-201ENST00000390453 MYCNP04198 464 aaPredicted RBP8.33□□□□□ -1.08
TRAV24-201ENST00000390453 MAPK8IP2Q13387 824 aaPredicted RBP8.33□□□□□ -1.08
TRAV24-201ENST00000390453 HOXD11P31277 338 aaPredicted RBP8.32□□□□□ -1.08
TRAV24-201ENST00000390453 SLC4A2P04920 1241 aa8.3□□□□□ -1.08
TRAV24-201ENST00000390453 DMRT2Q9Y5R5 561 aa8.23□□□□□ -1.09
TRAV24-201ENST00000390453 PLCB2Q00722 1185 aa8.06□□□□□ -1.12
TRAV24-201ENST00000390453 FBXO3Q9UK99 471 aa8.06□□□□□ -1.12
TRAV24-201ENST00000390453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.05□□□□□ -1.12
TRAV24-201ENST00000390453 HNRNPUL2Q1KMD3 747 aaKnown RBP8.05□□□□□ -1.12
TRAV24-201ENST00000390453 SAMD1Q6SPF0 538 aaPredicted RBP8.02□□□□□ -1.13
TRAV24-201ENST00000390453 BCANQ96GW7 911 aa7.97□□□□□ -1.13
TRAV24-201ENST00000390453 ATF5Q9Y2D1 282 aaPredicted RBP7.94□□□□□ -1.14
TRAV24-201ENST00000390453 VSIG10Q8N0Z9 540 aa7.91□□□□□ -1.14
TRAV24-201ENST00000390453 HAP1P54257 671 aaPredicted RBP7.88□□□□□ -1.15
TRAV24-201ENST00000390453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRAV24-201ENST00000390453 PROM2Q8N271 834 aa7.86□□□□□ -1.15
TRAV24-201ENST00000390453 APLP2Q06481 763 aa7.85□□□□□ -1.15
TRAV24-201ENST00000390453 SPDYE4A6NLX3 237 aa7.83□□□□□ -1.16
TRAV24-201ENST00000390453 VASPP50552 380 aaPredicted RBP7.83□□□□□ -1.16
TRAV24-201ENST00000390453 ZNF219Q9P2Y4 722 aaPredicted RBP7.82□□□□□ -1.16
TRAV24-201ENST00000390453 TAOK2Q9UL54 1235 aa7.82□□□□□ -1.16
TRAV24-201ENST00000390453 U3KPZ7 1027 aaPredicted RBP7.79□□□□□ -1.16
TRAV24-201ENST00000390453 DCAF8L2P0C7V8 631 aa7.74□□□□□ -1.17
TRAV24-201ENST00000390453 IFNLR1Q8IU57 520 aaPredicted RBP7.74□□□□□ -1.17
TRAV24-201ENST00000390453 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.74□□□□□ -1.17
TRAV24-201ENST00000390453 PKD2Q13563 968 aa7.73□□□□□ -1.17
TRAV24-201ENST00000390453 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
TRAV24-201ENST00000390453 PRKCSHP14314 528 aaPredicted RBP7.72□□□□□ -1.17
TRAV24-201ENST00000390453 DCAF8L1A6NGE4 600 aa7.71□□□□□ -1.18
TRAV24-201ENST00000390453 FBLN2P98095 1184 aa7.69□□□□□ -1.18
TRAV24-201ENST00000390453 MKRN4PQ13434 485 aaPredicted RBP7.66□□□□□ -1.18
TRAV24-201ENST00000390453 TPRNQ4KMQ1 711 aa7.64□□□□□ -1.19
TRAV24-201ENST00000390453 KDM2AQ9Y2K7 1162 aa7.62□□□□□ -1.19
TRAV24-201ENST00000390453 SPOCK2Q92563 424 aa7.6□□□□□ -1.19
TRAV24-201ENST00000390453 PAXIP1Q6ZW49 1069 aaPredicted RBP7.58□□□□□ -1.2
TRAV24-201ENST00000390453 ECM2O94769 699 aaPredicted RBP7.57□□□□□ -1.2
TRAV24-201ENST00000390453 SPRYD3Q8NCJ5 442 aa7.57□□□□□ -1.2
TRAV24-201ENST00000390453 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
TRAV24-201ENST00000390453 CFAP44Q96MT7 982 aa7.54□□□□□ -1.2
TRAV24-201ENST00000390453 STAG3Q9UJ98 1225 aa7.54□□□□□ -1.2
TRAV24-201ENST00000390453 NPM1P06748 294 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAV24-201ENST00000390453 KLHL34Q8N239 644 aa7.53□□□□□ -1.2
TRAV24-201ENST00000390453 ZBTB12Q9Y330 459 aaPredicted RBP7.53□□□□□ -1.2
TRAV24-201ENST00000390453 DNAJC5Q9H3Z4 198 aa7.5□□□□□ -1.21
TRAV24-201ENST00000390453 POLA2Q14181 598 aa7.47□□□□□ -1.21
TRAV24-201ENST00000390453 NBR1Q14596 966 aa7.47□□□□□ -1.21
TRAV24-201ENST00000390453 TSHZ2Q9NRE2 1034 aa7.46□□□□□ -1.22
TRAV24-201ENST00000390453 TRIM41Q8WV44 630 aa7.45□□□□□ -1.22
TRAV24-201ENST00000390453 RGL2O15211 777 aa7.44□□□□□ -1.22
TRAV24-201ENST00000390453 TRHP20396 242 aaPredicted RBP7.41□□□□□ -1.22
TRAV24-201ENST00000390453 ZBTB47Q9UFB7 747 aaPredicted RBP7.41□□□□□ -1.22
TRAV24-201ENST00000390453 PLCD3Q8N3E9 789 aa7.4□□□□□ -1.22
TRAV24-201ENST00000390453 ARXQ96QS3 562 aa7.4□□□□□ -1.22
TRAV24-201ENST00000390453 CHGAP10645 457 aaKnown RBP7.38□□□□□ -1.23
TRAV24-201ENST00000390453 HS6ST3Q8IZP7 471 aa7.37□□□□□ -1.23
TRAV24-201ENST00000390453 GTF3C3Q9Y5Q9 886 aa7.37□□□□□ -1.23
TRAV24-201ENST00000390453 PLEKHG5O94827 1062 aa7.36□□□□□ -1.23
TRAV24-201ENST00000390453 TIMELESSQ9UNS1 1208 aa7.35□□□□□ -1.23
TRAV24-201ENST00000390453 MIER1Q8N108 512 aa7.34□□□□□ -1.23
TRAV24-201ENST00000390453 ZNF692Q9BU19 519 aaPredicted RBP7.34□□□□□ -1.23
TRAV24-201ENST00000390453 SPINK5Q9NQ38 1064 aaPredicted RBP7.34□□□□□ -1.23
TRAV24-201ENST00000390453 SPDYE2BA6NHP3 402 aa7.33□□□□□ -1.24
TRAV24-201ENST00000390453 TULP1O00294 542 aaPredicted RBP7.33□□□□□ -1.24
TRAV24-201ENST00000390453 SPDYE6P0CI01 402 aa7.33□□□□□ -1.24
TRAV24-201ENST00000390453 SPDYE2Q495Y8 402 aa7.33□□□□□ -1.24
TRAV24-201ENST00000390453 CAPN15O75808 1086 aa7.32□□□□□ -1.24
TRAV24-201ENST00000390453 TMEM132AQ24JP5 1023 aa7.32□□□□□ -1.24
TRAV24-201ENST00000390453 SSUH2Q9Y2M2 353 aa7.32□□□□□ -1.24
TRAV24-201ENST00000390453 DAXXQ9UER7 740 aaPredicted RBP7.31□□□□□ -1.24
TRAV24-201ENST00000390453 CIZ1Q9ULV3 898 aaPredicted RBP7.31□□□□□ -1.24
TRAV24-201ENST00000390453 C1QBPQ07021 282 aaKnown RBP7.26□□□□□ -1.25
TRAV24-201ENST00000390453 GSE1Q14687 1217 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms