Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
LCE4AQ5TA78 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC2.55□□□□□ -2
LCE4AQ5TA78 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC2.55□□□□□ -2
LCE4AQ5TA78 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 MCF2-209ENST00000520602 3945 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 TNC-210ENST00000535648 7508 ntTSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 PEX5-202ENST00000266564 3170 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 RNF31-211ENST00000559275 3198 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 MAPK10-287ENST00000641217 3037 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 BTN2A2-203ENST00000416795 2733 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 AC105429.1-201ENST00000612833 4001 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 ATL1-201ENST00000358385 2647 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 RNU6-865P-201ENST00000364772 107 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 RNU6-811P-201ENST00000384069 107 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 SNORA2B-201ENST00000384583 137 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
LCE4AQ5TA78 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
LCE4AQ5TA78 ARSFP1-201ENST00000398758 477 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 KRT18P52-201ENST00000404956 846 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 RNA5SP261-201ENST00000410536 106 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC2.54□□□□□ -2
LCE4AQ5TA78 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 DDX11L10-201ENST00000430178 571 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 CST9LP2-201ENST00000437612 320 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 RPL12P49-201ENST00000441100 121 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 RN7SL143P-201ENST00000496780 297 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 AC093815.1-201ENST00000508637 280 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 RN7SKP276-201ENST00000516242 268 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 AC007536.1-201ENST00000533382 349 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 IGHV1OR15-3-201ENST00000564926 351 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 RN7SL426P-201ENST00000579106 295 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC2.54□□□□□ -2
LCE4AQ5TA78 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.54□□□□□ -2
LCE4AQ5TA78 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC2.54□□□□□ -2
LCE4AQ5TA78 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
LCE4AQ5TA78 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC2.54□□□□□ -2
LCE4AQ5TA78 ZNF185-210ENST00000454925 3191 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
LCE4AQ5TA78 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms