RNA–Protein interactions for RNA: ENST00000358385.10

ATL1-201, Transcript of atlastin GTPase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL1, Length 2,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-201ENST00000358385 NISCHQ9Y2I1 1504 aa19.85■□□□□ 0.77
ATL1-201ENST00000358385 PELP1Q8IZL8 1130 aaKnown RBP17.63■□□□□ 0.41
ATL1-201ENST00000358385 MYT1Q01538 1121 aa17.16■□□□□ 0.34
ATL1-201ENST00000358385 HRCP23327 699 aa17.14■□□□□ 0.33
ATL1-201ENST00000358385 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
ATL1-201ENST00000358385 PPARGC1BQ86YN6 1023 aaKnown RBP16.76■□□□□ 0.27
ATL1-201ENST00000358385 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
ATL1-201ENST00000358385 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
ATL1-201ENST00000358385 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
ATL1-201ENST00000358385 DCAF8L2P0C7V8 631 aa16.51■□□□□ 0.23
ATL1-201ENST00000358385 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
ATL1-201ENST00000358385 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
ATL1-201ENST00000358385 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
ATL1-201ENST00000358385 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
ATL1-201ENST00000358385 ABCC9O60706 1549 aa16.07■□□□□ 0.16
ATL1-201ENST00000358385 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
ATL1-201ENST00000358385 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
ATL1-201ENST00000358385 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
ATL1-201ENST00000358385 PRKCSHP14314 528 aaPredicted RBP15.93■□□□□ 0.14
ATL1-201ENST00000358385 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
ATL1-201ENST00000358385 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
ATL1-201ENST00000358385 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
ATL1-201ENST00000358385 NACADO15069 1562 aa15.85■□□□□ 0.13
ATL1-201ENST00000358385 FAM9AQ8IZU1 332 aaPredicted RBP15.83■□□□□ 0.13
ATL1-201ENST00000358385 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
ATL1-201ENST00000358385 ZEB1P37275 1124 aaPredicted RBP15.81■□□□□ 0.12
ATL1-201ENST00000358385 TRIM26Q12899 539 aaPredicted RBP15.69■□□□□ 0.1
ATL1-201ENST00000358385 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
ATL1-201ENST00000358385 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
ATL1-201ENST00000358385 RSF1Q96T23 1441 aaPredicted RBP15.57■□□□□ 0.08
ATL1-201ENST00000358385 ERICH6Q7L0X2 663 aa15.52■□□□□ 0.08
ATL1-201ENST00000358385 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
ATL1-201ENST00000358385 ANP32EQ9BTT0 268 aa15.48■□□□□ 0.07
ATL1-201ENST00000358385 APLP2Q06481 763 aa15.4■□□□□ 0.06
ATL1-201ENST00000358385 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
ATL1-201ENST00000358385 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
ATL1-201ENST00000358385 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
ATL1-201ENST00000358385 LOC105371045A0A1W2PR82 267 aa15.32■□□□□ 0.04
ATL1-201ENST00000358385 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
ATL1-201ENST00000358385 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
ATL1-201ENST00000358385 WIZO95785 1651 aa15.28■□□□□ 0.04
ATL1-201ENST00000358385 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
ATL1-201ENST00000358385 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
ATL1-201ENST00000358385 SMARCA4P51532 1647 aa15.18■□□□□ 0.02
ATL1-201ENST00000358385 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
ATL1-201ENST00000358385 TSHZ2Q9NRE2 1034 aa15.09■□□□□ 0.01
ATL1-201ENST00000358385 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
ATL1-201ENST00000358385 TRIM41Q8WV44 630 aa15.07■□□□□ 0
ATL1-201ENST00000358385 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
ATL1-201ENST00000358385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
ATL1-201ENST00000358385 CCER1Q8TC90 406 aaPredicted RBP14.97□□□□□ -0.01
ATL1-201ENST00000358385 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
ATL1-201ENST00000358385 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.01
ATL1-201ENST00000358385 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
ATL1-201ENST00000358385 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
ATL1-201ENST00000358385 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
ATL1-201ENST00000358385 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
ATL1-201ENST00000358385 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
ATL1-201ENST00000358385 MIER1Q8N108 512 aa14.85□□□□□ -0.03
ATL1-201ENST00000358385 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.03
ATL1-201ENST00000358385 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
ATL1-201ENST00000358385 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
ATL1-201ENST00000358385 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.04
ATL1-201ENST00000358385 UBE2Q2Q8WVN8 375 aa14.69□□□□□ -0.06
ATL1-201ENST00000358385 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
ATL1-201ENST00000358385 SALL2Q9Y467 1007 aaPredicted RBP14.66□□□□□ -0.06
ATL1-201ENST00000358385 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
ATL1-201ENST00000358385 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
ATL1-201ENST00000358385 WRNQ14191 1432 aaPredicted RBP eCLIP14.64□□□□□ -0.07
ATL1-201ENST00000358385 MSH5O43196 834 aa14.62□□□□□ -0.07
ATL1-201ENST00000358385 SOGA1O94964 1423 aa14.62□□□□□ -0.07
ATL1-201ENST00000358385 CCDC136Q96JN2 1154 aa14.62□□□□□ -0.07
ATL1-201ENST00000358385 DEKP35659 375 aaKnown RBP14.58□□□□□ -0.08
ATL1-201ENST00000358385 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
ATL1-201ENST00000358385 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
ATL1-201ENST00000358385 BCANQ96GW7 911 aa14.55□□□□□ -0.08
ATL1-201ENST00000358385 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
ATL1-201ENST00000358385 EIF5BO60841 1220 aaKnown RBP14.54□□□□□ -0.08
ATL1-201ENST00000358385 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
ATL1-201ENST00000358385 ERICH6BQ5W0A0 696 aa14.51□□□□□ -0.09
ATL1-201ENST00000358385 EEA1Q15075 1411 aa14.51□□□□□ -0.09
ATL1-201ENST00000358385 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
ATL1-201ENST00000358385 CFTRP13569 1480 aa14.45□□□□□ -0.1
ATL1-201ENST00000358385 TOP2BQ02880 1626 aa14.42□□□□□ -0.1
ATL1-201ENST00000358385 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
ATL1-201ENST00000358385 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
ATL1-201ENST00000358385 FKBP8Q14318 412 aa14.4□□□□□ -0.1
ATL1-201ENST00000358385 FANCIQ9NVI1 1328 aa14.4□□□□□ -0.1
ATL1-201ENST00000358385 TNIKQ9UKE5 1360 aa14.4□□□□□ -0.1
ATL1-201ENST00000358385 CEP162Q5TB80 1403 aa14.38□□□□□ -0.11
ATL1-201ENST00000358385 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
ATL1-201ENST00000358385 BIVM-ERCC5R4GMW8 1640 aa14.38□□□□□ -0.11
ATL1-201ENST00000358385 CUX1P39880 1505 aa14.36□□□□□ -0.11
ATL1-201ENST00000358385 CADPSQ9ULU8 1353 aa14.36□□□□□ -0.11
ATL1-201ENST00000358385 PKNOX2Q96KN3 472 aa14.36□□□□□ -0.11
ATL1-201ENST00000358385 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.11
ATL1-201ENST00000358385 ITGAEP38570 1179 aa14.32□□□□□ -0.12
ATL1-201ENST00000358385 KIF21BO75037 1637 aa14.31□□□□□ -0.12
ATL1-201ENST00000358385 IL27Q8NEV9 243 aa14.29□□□□□ -0.12
ATL1-201ENST00000358385 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms