RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 AEBP2Q6ZN18 517 aaPredicted RBP9.8□□□□□ -0.84
LINC00407-201ENST00000426509 CHIC1Q5VXU3 224 aa9.4□□□□□ -0.9
LINC00407-201ENST00000426509 PHF23Q9BUL5 403 aaPredicted RBP8.3□□□□□ -1.08
LINC00407-201ENST00000426509 SENP3Q9H4L4 574 aaPredicted RBP8.24□□□□□ -1.09
LINC00407-201ENST00000426509 FOXD1Q16676 465 aa7.73□□□□□ -1.17
LINC00407-201ENST00000426509 POTEDQ86YR6 584 aa7.59□□□□□ -1.19
LINC00407-201ENST00000426509 PLPPR3Q6T4P5 718 aa7.52□□□□□ -1.21
LINC00407-201ENST00000426509 PPP6R1Q9UPN7 881 aa7.38□□□□□ -1.23
LINC00407-201ENST00000426509 ADRA2BP18089 450 aa7.33□□□□□ -1.24
LINC00407-201ENST00000426509 MSH5O43196 834 aa7.28□□□□□ -1.24
LINC00407-201ENST00000426509 PIAS4Q8N2W9 510 aaPredicted RBP7.19□□□□□ -1.26
LINC00407-201ENST00000426509 MAPK8IP2Q13387 824 aaPredicted RBP6.71□□□□□ -1.34
LINC00407-201ENST00000426509 PPP4R3CPQ6ZMV5 832 aa6.65□□□□□ -1.34
LINC00407-201ENST00000426509 SCAF1Q9H7N4 1312 aaKnown RBP6.61□□□□□ -1.35
LINC00407-201ENST00000426509 DMRT2Q9Y5R5 561 aa6.59□□□□□ -1.35
LINC00407-201ENST00000426509 CNKSR2Q8WXI2 1034 aa6.47□□□□□ -1.37
LINC00407-201ENST00000426509 HOXD11P31277 338 aaPredicted RBP6.42□□□□□ -1.38
LINC00407-201ENST00000426509 CACNB1Q02641 598 aaPredicted RBP6.42□□□□□ -1.38
LINC00407-201ENST00000426509 RNF216Q9NWF9 866 aaPredicted RBP6.38□□□□□ -1.39
LINC00407-201ENST00000426509 NCBP3Q53F19 620 aaKnown RBP6.37□□□□□ -1.39
LINC00407-201ENST00000426509 KCNA4P22459 653 aa6.36□□□□□ -1.39
LINC00407-201ENST00000426509 NPM3O75607 178 aaKnown RBP6.34□□□□□ -1.39
LINC00407-201ENST00000426509 DCAF8L1A6NGE4 600 aa6.25□□□□□ -1.41
LINC00407-201ENST00000426509 DNAJC5BQ9UF47 199 aa6.2□□□□□ -1.42
LINC00407-201ENST00000426509 RNF39Q9H2S5 420 aa6.12□□□□□ -1.43
LINC00407-201ENST00000426509 SLC4A2P04920 1241 aa6.07□□□□□ -1.44
LINC00407-201ENST00000426509 C1QBPQ07021 282 aaKnown RBP6.06□□□□□ -1.44
LINC00407-201ENST00000426509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00407-201ENST00000426509 U3KPZ7 1027 aaPredicted RBP6□□□□□ -1.45
LINC00407-201ENST00000426509 SLC4A1APQ9BWU0 796 aaKnown RBP5.99□□□□□ -1.45
LINC00407-201ENST00000426509 POTEHQ6S545 545 aa5.91□□□□□ -1.46
LINC00407-201ENST00000426509 ZBTB22O15209 634 aa5.89□□□□□ -1.47
LINC00407-201ENST00000426509 SPINK5Q9NQ38 1064 aaPredicted RBP5.88□□□□□ -1.47
LINC00407-201ENST00000426509 NISCHQ9Y2I1 1504 aa5.85□□□□□ -1.47
LINC00407-201ENST00000426509 FOXD4L1Q9NU39 408 aa5.85□□□□□ -1.47
LINC00407-201ENST00000426509 MYCNP04198 464 aaPredicted RBP5.82□□□□□ -1.48
LINC00407-201ENST00000426509 CAPN15O75808 1086 aa5.8□□□□□ -1.48
LINC00407-201ENST00000426509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.79□□□□□ -1.48
LINC00407-201ENST00000426509 DSG3P32926 999 aa5.79□□□□□ -1.48
LINC00407-201ENST00000426509 HNRNPUL2Q1KMD3 747 aaKnown RBP5.79□□□□□ -1.48
LINC00407-201ENST00000426509 SAMD1Q6SPF0 538 aaPredicted RBP5.78□□□□□ -1.48
LINC00407-201ENST00000426509 ATF5Q9Y2D1 282 aaPredicted RBP5.76□□□□□ -1.49
LINC00407-201ENST00000426509 TRHP20396 242 aaPredicted RBP5.75□□□□□ -1.49
LINC00407-201ENST00000426509 APLP2Q06481 763 aa5.73□□□□□ -1.49
LINC00407-201ENST00000426509 CSRNP3Q8WYN3 585 aa5.73□□□□□ -1.49
LINC00407-201ENST00000426509 ZNF219Q9P2Y4 722 aaPredicted RBP5.72□□□□□ -1.49
LINC00407-201ENST00000426509 ABCB7O75027 752 aa5.7□□□□□ -1.5
LINC00407-201ENST00000426509 EHMT2Q96KQ7 1210 aa5.7□□□□□ -1.5
LINC00407-201ENST00000426509 ATXN8OSP0DMR3 200 aa5.65□□□□□ -1.5
LINC00407-201ENST00000426509 POLA2Q14181 598 aa5.65□□□□□ -1.5
LINC00407-201ENST00000426509 ABCC9O60706 1549 aa5.61□□□□□ -1.51
LINC00407-201ENST00000426509 MKRN4PQ13434 485 aaPredicted RBP5.5□□□□□ -1.53
LINC00407-201ENST00000426509 ZBTB12Q9Y330 459 aaPredicted RBP5.47□□□□□ -1.53
LINC00407-201ENST00000426509 RBM42Q9BTD8 480 aaKnown RBP5.46□□□□□ -1.54
LINC00407-201ENST00000426509 OSCARQ8IYS5 282 aa5.45□□□□□ -1.54
LINC00407-201ENST00000426509 FBLN2P98095 1184 aa5.41□□□□□ -1.54
LINC00407-201ENST00000426509 CHRDL2Q6WN34 429 aa5.39□□□□□ -1.55
LINC00407-201ENST00000426509 SP7Q8TDD2 431 aaPredicted RBP5.39□□□□□ -1.55
LINC00407-201ENST00000426509 AKT1S1Q96B36 256 aa5.38□□□□□ -1.55
LINC00407-201ENST00000426509 SPDYE2BA6NHP3 402 aa5.36□□□□□ -1.55
LINC00407-201ENST00000426509 SPDYE6P0CI01 402 aa5.36□□□□□ -1.55
LINC00407-201ENST00000426509 SPDYE2Q495Y8 402 aa5.36□□□□□ -1.55
LINC00407-201ENST00000426509 REM2Q8IYK8 340 aaPredicted RBP5.36□□□□□ -1.55
LINC00407-201ENST00000426509 DNAJC5Q9H3Z4 198 aa5.34□□□□□ -1.55
LINC00407-201ENST00000426509 SSUH2Q9Y2M2 353 aa5.34□□□□□ -1.55
LINC00407-201ENST00000426509 ZNF692Q9BU19 519 aaPredicted RBP5.32□□□□□ -1.56
LINC00407-201ENST00000426509 PITPNM1O00562 1244 aa5.29□□□□□ -1.56
LINC00407-201ENST00000426509 PABPN1Q86U42 306 aaKnown RBP eCLIP5.26□□□□□ -1.57
LINC00407-201ENST00000426509 SPDYE4A6NLX3 237 aa5.24□□□□□ -1.57
LINC00407-201ENST00000426509 PIP4P2Q8N4L2 257 aa5.24□□□□□ -1.57
LINC00407-201ENST00000426509 FXR2P51116 673 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC00407-201ENST00000426509 SPDYE1Q8NFV5 336 aaPredicted RBP5.22□□□□□ -1.57
LINC00407-201ENST00000426509 HAX1O00165 279 aa5.2□□□□□ -1.58
LINC00407-201ENST00000426509 CLEC11AQ9Y240 323 aa5.2□□□□□ -1.58
LINC00407-201ENST00000426509 PROM2Q8N271 834 aa5.19□□□□□ -1.58
LINC00407-201ENST00000426509 PRR29P0C7W0 189 aa5.15□□□□□ -1.59
LINC00407-201ENST00000426509 PRKAR2AP13861 404 aaKnown RBP5.14□□□□□ -1.59
LINC00407-201ENST00000426509 CHADLQ6NUI6 762 aa5.14□□□□□ -1.59
LINC00407-201ENST00000426509 CCDC180Q9P1Z9 1646 aa5.12□□□□□ -1.59
LINC00407-201ENST00000426509 FKBP8Q14318 412 aa5.12□□□□□ -1.59
LINC00407-201ENST00000426509 EVX2Q03828 476 aa5.11□□□□□ -1.59
LINC00407-201ENST00000426509 STAG3Q9UJ98 1225 aa5.11□□□□□ -1.59
LINC00407-201ENST00000426509 CREBZFQ9NS37 354 aa5.1□□□□□ -1.59
LINC00407-201ENST00000426509 RB1CC1Q8TDY2 1594 aa5.08□□□□□ -1.6
LINC00407-201ENST00000426509 FARP1Q9Y4F1 1045 aaPredicted RBP5.07□□□□□ -1.6
LINC00407-201ENST00000426509 C19orf67A6NJJ6 358 aa5.06□□□□□ -1.6
LINC00407-201ENST00000426509 MNX1P50219 401 aaPredicted RBP5.06□□□□□ -1.6
LINC00407-201ENST00000426509 LHX8Q68G74 356 aa5.05□□□□□ -1.6
LINC00407-201ENST00000426509 CECR2Q9BXF3 1484 aa5.05□□□□□ -1.6
LINC00407-201ENST00000426509 BICRAQ9NZM4 1560 aa5.04□□□□□ -1.6
LINC00407-201ENST00000426509 PLSCR2Q9NRY7 297 aa5.03□□□□□ -1.6
LINC00407-201ENST00000426509 CC2D2AQ9P2K1 1620 aa4.99□□□□□ -1.61
LINC00407-201ENST00000426509 DCAF8L2P0C7V8 631 aa4.99□□□□□ -1.61
LINC00407-201ENST00000426509 TRIM41Q8WV44 630 aa4.99□□□□□ -1.61
LINC00407-201ENST00000426509 MIER1Q8N108 512 aa4.98□□□□□ -1.61
LINC00407-201ENST00000426509 NACADO15069 1562 aa4.97□□□□□ -1.61
LINC00407-201ENST00000426509 ZCCHC6Q5VYS8 1495 aaKnown RBP4.97□□□□□ -1.61
LINC00407-201ENST00000426509 CD44P16070 742 aaKnown RBP4.97□□□□□ -1.61
LINC00407-201ENST00000426509 GABBR2O75899 941 aa4.96□□□□□ -1.62
LINC00407-201ENST00000426509 UNC13AQ9UPW8 1703 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms