Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNY1P6-201ENST00000384193 109 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 MRPL35P3-201ENST00000421557 364 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 AC022296.2-201ENST00000512424 202 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 AC015801.1-201ENST00000585651 153 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 AC097639.2-201ENST00000603159 172 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 FAS-AS1.1-201ENST00000615327 126 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 AC125336.1-201ENST00000508893 2827 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 TTC3P1-201ENST00000399586 6081 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 AL356292.1-201ENST00000283110 373 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 RNU1-62P-201ENST00000362599 164 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 RNU6-633P-201ENST00000362612 103 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 Y_RNA.634-201ENST00000364811 113 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 MIR548A2-201ENST00000384956 97 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 SNORA40C-201ENST00000391285 128 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 RN7SKP233-201ENST00000517005 110 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 RPL10P18-201ENST00000519384 309 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 AC109329.2-201ENST00000519658 482 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 AP005597.2-201ENST00000526238 341 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 AL031846.1-201ENST00000560933 314 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 MIR4428-201ENST00000584884 73 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 AC025754.2-201ENST00000606491 432 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 MIR548BB-201ENST00000626714 66 ntBASIC7.78□□□□□ -1.16
RNF39Q9H2S5 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF39Q9H2S5 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF39Q9H2S5 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF39Q9H2S5 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RNF39Q9H2S5 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
RNF39Q9H2S5 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.16
RNF39Q9H2S5 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 RNU6-170P-201ENST00000362832 104 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 MIR152-201ENST00000385212 87 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 RNU1-56P-201ENST00000391303 164 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 AL357515.1-201ENST00000402967 542 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 MIR1912-201ENST00000410389 80 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 RNA5SP115-201ENST00000411160 107 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 RNA5SP154-201ENST00000516193 111 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 AL161420.1-201ENST00000619393 264 ntBASIC7.77□□□□□ -1.17
RNF39Q9H2S5 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF39Q9H2S5 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms