RNA–Protein interactions for RNA: ENST00000626714.1

MIR548BB-201, Transcript of microRNA 548bb, humanhuman

BASIC

Gene MIR548BB, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548BB-201ENST00000626714 AEBP2Q6ZN18 517 aaPredicted RBP11.75□□□□□ -0.53
MIR548BB-201ENST00000626714 CHIC1Q5VXU3 224 aa11.02□□□□□ -0.65
MIR548BB-201ENST00000626714 SENP3Q9H4L4 574 aaPredicted RBP10.17□□□□□ -0.78
MIR548BB-201ENST00000626714 POTEDQ86YR6 584 aa10.13□□□□□ -0.79
MIR548BB-201ENST00000626714 PHF23Q9BUL5 403 aaPredicted RBP9.93□□□□□ -0.82
MIR548BB-201ENST00000626714 FOXD1Q16676 465 aa9.53□□□□□ -0.88
MIR548BB-201ENST00000626714 MSH5O43196 834 aa9.22□□□□□ -0.93
MIR548BB-201ENST00000626714 PIAS4Q8N2W9 510 aaPredicted RBP8.77□□□□□ -1.01
MIR548BB-201ENST00000626714 PPP6R1Q9UPN7 881 aa8.39□□□□□ -1.07
MIR548BB-201ENST00000626714 ADRA2BP18089 450 aa8.33□□□□□ -1.08
MIR548BB-201ENST00000626714 CACNB1Q02641 598 aaPredicted RBP8.33□□□□□ -1.08
MIR548BB-201ENST00000626714 PLPPR3Q6T4P5 718 aa8.12□□□□□ -1.11
MIR548BB-201ENST00000626714 DMRT2Q9Y5R5 561 aa7.95□□□□□ -1.14
MIR548BB-201ENST00000626714 MAPK8IP2Q13387 824 aaPredicted RBP7.85□□□□□ -1.15
MIR548BB-201ENST00000626714 POTEHQ6S545 545 aa7.82□□□□□ -1.16
MIR548BB-201ENST00000626714 RNF39Q9H2S5 420 aa7.78□□□□□ -1.16
MIR548BB-201ENST00000626714 DCAF8L1A6NGE4 600 aa7.68□□□□□ -1.18
MIR548BB-201ENST00000626714 SCAF1Q9H7N4 1312 aaKnown RBP7.67□□□□□ -1.18
MIR548BB-201ENST00000626714 C1QBPQ07021 282 aaKnown RBP7.65□□□□□ -1.18
MIR548BB-201ENST00000626714 HOXD11P31277 338 aaPredicted RBP7.39□□□□□ -1.23
MIR548BB-201ENST00000626714 DNAJC5BQ9UF47 199 aa7.28□□□□□ -1.24
MIR548BB-201ENST00000626714 RNF216Q9NWF9 866 aaPredicted RBP7.16□□□□□ -1.26
MIR548BB-201ENST00000626714 DSG3P32926 999 aa7.07□□□□□ -1.28
MIR548BB-201ENST00000626714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.06□□□□□ -1.28
MIR548BB-201ENST00000626714 CNKSR2Q8WXI2 1034 aa7.05□□□□□ -1.28
MIR548BB-201ENST00000626714 PPP4R3CPQ6ZMV5 832 aa7.02□□□□□ -1.29
MIR548BB-201ENST00000626714 SP7Q8TDD2 431 aaPredicted RBP7.01□□□□□ -1.29
MIR548BB-201ENST00000626714 CAPN15O75808 1086 aa6.96□□□□□ -1.3
MIR548BB-201ENST00000626714 SPINK5Q9NQ38 1064 aaPredicted RBP6.91□□□□□ -1.3
MIR548BB-201ENST00000626714 CHRDL2Q6WN34 429 aa6.89□□□□□ -1.31
MIR548BB-201ENST00000626714 U3KPZ7 1027 aaPredicted RBP6.8□□□□□ -1.32
MIR548BB-201ENST00000626714 RBM42Q9BTD8 480 aaKnown RBP6.79□□□□□ -1.32
MIR548BB-201ENST00000626714 PLSCR2Q9NRY7 297 aa6.74□□□□□ -1.33
MIR548BB-201ENST00000626714 ABCB7O75027 752 aa6.72□□□□□ -1.33
MIR548BB-201ENST00000626714 TRHP20396 242 aaPredicted RBP6.68□□□□□ -1.34
MIR548BB-201ENST00000626714 HAX1O00165 279 aa6.66□□□□□ -1.34
MIR548BB-201ENST00000626714 ZNF219Q9P2Y4 722 aaPredicted RBP6.66□□□□□ -1.34
MIR548BB-201ENST00000626714 APLP2Q06481 763 aa6.6□□□□□ -1.35
MIR548BB-201ENST00000626714 NCBP3Q53F19 620 aaKnown RBP6.57□□□□□ -1.36
MIR548BB-201ENST00000626714 LHX8Q68G74 356 aa6.57□□□□□ -1.36
MIR548BB-201ENST00000626714 PIP4P2Q8N4L2 257 aa6.57□□□□□ -1.36
MIR548BB-201ENST00000626714 EVX2Q03828 476 aa6.48□□□□□ -1.37
MIR548BB-201ENST00000626714 AKT1S1Q96B36 256 aa6.48□□□□□ -1.37
MIR548BB-201ENST00000626714 NPM3O75607 178 aaKnown RBP6.43□□□□□ -1.38
MIR548BB-201ENST00000626714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.42□□□□□ -1.38
MIR548BB-201ENST00000626714 FXR2P51116 673 aaKnown RBP eCLIP6.42□□□□□ -1.38
MIR548BB-201ENST00000626714 HNRNPUL2Q1KMD3 747 aaKnown RBP6.42□□□□□ -1.38
MIR548BB-201ENST00000626714 REM2Q8IYK8 340 aaPredicted RBP6.4□□□□□ -1.38
MIR548BB-201ENST00000626714 POLA2Q14181 598 aa6.34□□□□□ -1.39
MIR548BB-201ENST00000626714 SAMD1Q6SPF0 538 aaPredicted RBP6.34□□□□□ -1.39
MIR548BB-201ENST00000626714 PITPNM1O00562 1244 aa6.33□□□□□ -1.4
MIR548BB-201ENST00000626714 GABBR2O75899 941 aa6.32□□□□□ -1.4
MIR548BB-201ENST00000626714 SLC4A2P04920 1241 aa6.31□□□□□ -1.4
MIR548BB-201ENST00000626714 C19orf67A6NJJ6 358 aa6.24□□□□□ -1.41
MIR548BB-201ENST00000626714 POTEMA6NI47 508 aa6.22□□□□□ -1.41
MIR548BB-201ENST00000626714 PRKAR2AP13861 404 aaKnown RBP6.18□□□□□ -1.42
MIR548BB-201ENST00000626714 POTEGQ6S5H5 508 aa6.18□□□□□ -1.42
MIR548BB-201ENST00000626714 PCDH10Q9P2E7 1040 aa6.18□□□□□ -1.42
MIR548BB-201ENST00000626714 ZBTB12Q9Y330 459 aaPredicted RBP6.18□□□□□ -1.42
MIR548BB-201ENST00000626714 POTEIP0CG38 1075 aa6.16□□□□□ -1.42
MIR548BB-201ENST00000626714 OSCARQ8IYS5 282 aa6.16□□□□□ -1.42
MIR548BB-201ENST00000626714 OTUD5Q96G74 571 aa6.08□□□□□ -1.44
MIR548BB-201ENST00000626714 CLCN6P51797 869 aa6.03□□□□□ -1.44
MIR548BB-201ENST00000626714 DCBLD2Q96PD2 775 aa6.03□□□□□ -1.44
MIR548BB-201ENST00000626714 CLEC11AQ9Y240 323 aa6.02□□□□□ -1.45
MIR548BB-201ENST00000626714 MYCNP04198 464 aaPredicted RBP5.99□□□□□ -1.45
MIR548BB-201ENST00000626714 SPDYE1Q8NFV5 336 aaPredicted RBP5.99□□□□□ -1.45
MIR548BB-201ENST00000626714 CD44P16070 742 aaKnown RBP5.95□□□□□ -1.46
MIR548BB-201ENST00000626714 CHADLQ6NUI6 762 aa5.95□□□□□ -1.46
MIR548BB-201ENST00000626714 POTEB2H3BUK9 544 aa5.94□□□□□ -1.46
MIR548BB-201ENST00000626714 SPDYE2BA6NHP3 402 aa5.92□□□□□ -1.46
MIR548BB-201ENST00000626714 SPDYE6P0CI01 402 aa5.92□□□□□ -1.46
MIR548BB-201ENST00000626714 SPDYE2Q495Y8 402 aa5.92□□□□□ -1.46
MIR548BB-201ENST00000626714 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
MIR548BB-201ENST00000626714 ATF5Q9Y2D1 282 aaPredicted RBP5.87□□□□□ -1.47
MIR548BB-201ENST00000626714 FAM163AQ96GL9 167 aaPredicted RBP5.86□□□□□ -1.47
MIR548BB-201ENST00000626714 PRR29P0C7W0 189 aa5.83□□□□□ -1.48
MIR548BB-201ENST00000626714 CDAN1Q8IWY9 1227 aa5.81□□□□□ -1.48
MIR548BB-201ENST00000626714 ZNF579Q8NAF0 562 aaKnown RBP5.81□□□□□ -1.48
MIR548BB-201ENST00000626714 FARP1Q9Y4F1 1045 aaPredicted RBP5.8□□□□□ -1.48
MIR548BB-201ENST00000626714 MAMSTRQ6ZN01 415 aa5.79□□□□□ -1.48
MIR548BB-201ENST00000626714 GALR2O43603 387 aaPredicted RBP5.78□□□□□ -1.48
MIR548BB-201ENST00000626714 ZRANB1Q9UGI0 708 aa5.76□□□□□ -1.49
MIR548BB-201ENST00000626714 POTEJP0CG39 1038 aa5.74□□□□□ -1.49
MIR548BB-201ENST00000626714 FBLN2P98095 1184 aa5.74□□□□□ -1.49
MIR548BB-201ENST00000626714 ZNF692Q9BU19 519 aaPredicted RBP5.74□□□□□ -1.49
MIR548BB-201ENST00000626714 SSUH2Q9Y2M2 353 aa5.74□□□□□ -1.49
MIR548BB-201ENST00000626714 MMRN1Q13201 1228 aa5.73□□□□□ -1.49
MIR548BB-201ENST00000626714 PELP1Q8IZL8 1130 aaKnown RBP5.72□□□□□ -1.49
MIR548BB-201ENST00000626714 SCUBE2Q9NQ36 999 aa5.72□□□□□ -1.49
MIR548BB-201ENST00000626714 METRNQ9UJH8 293 aa5.71□□□□□ -1.5
MIR548BB-201ENST00000626714 KCNA4P22459 653 aa5.7□□□□□ -1.5
MIR548BB-201ENST00000626714 C7P10643 843 aa5.68□□□□□ -1.5
MIR548BB-201ENST00000626714 SPNS2Q8IVW8 549 aa5.67□□□□□ -1.5
MIR548BB-201ENST00000626714 SLC39A7Q92504 469 aa5.67□□□□□ -1.5
MIR548BB-201ENST00000626714 PABPN1Q86U42 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
MIR548BB-201ENST00000626714 ASTLQ6HA08 431 aaPredicted RBP5.62□□□□□ -1.51
MIR548BB-201ENST00000626714 PHF12Q96QT6 1004 aa5.6□□□□□ -1.51
MIR548BB-201ENST00000626714 ATMINO43313 823 aaPredicted RBP5.59□□□□□ -1.51
MIR548BB-201ENST00000626714 PAK3O75914 559 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms