Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 FAM35BP-202ENST00000497389 3337 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PARP6-202ENST00000287196 2625 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PCDHGA5-202ENST00000611914 3552 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CATSPERG-204ENST00000410018 3626 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AL034546.1-201ENST00000623740 3693 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CYP4F35P-201ENST00000582957 2876 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HS6ST3-202ENST00000620595 7073 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-485P-201ENST00000363475 107 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNVU1-7-201ENST00000383858 164 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MIR551B-201ENST00000384984 96 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SNORA48.1-201ENST00000390879 135 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-243P-201ENST00000391140 107 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-1254P-201ENST00000391266 104 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MIR1250-201ENST00000408098 113 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNA5SP265-201ENST00000411023 111 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HMGN2P30-201ENST00000423237 256 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RPL18P10-201ENST00000425606 538 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC083855.1-201ENST00000440041 258 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RPS29P16-201ENST00000452798 171 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 snoU13.14-201ENST00000459372 104 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RN7SL168P-201ENST00000463821 279 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC068531.1-201ENST00000502398 195 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC114781.3-201ENST00000512083 142 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC117383.2-201ENST00000514722 322 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RNU6-231P-201ENST00000517122 103 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SNORA40.16-201ENST00000517238 121 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AP004371.1-201ENST00000525240 214 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC006349.1-201ENST00000555526 235 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MIR378H-201ENST00000579966 83 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MIR7162-201ENST00000611134 69 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 METAP1-212ENST00000625963 147 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 RASGRP4-204ENST00000454404 3116 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 SALL2-201ENST00000450879 3178 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZMYND11-207ENST00000397959 4138 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PIK3R5-209ENST00000581552 3253 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 TMEM246-201ENST00000374847 4223 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 DDX19B-201ENST00000288071 3386 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ADGRF3-203ENST00000421160 3353 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 EXOC2-201ENST00000230449 4449 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 NDUFAF5-202ENST00000378106 5529 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF418-202ENST00000425570 3547 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ACSS1-205ENST00000537502 3509 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 AL133325.3-201ENST00000622757 3674 ntBASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF469-202ENST00000565624 13279 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms