RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 POTEDQ86YR6 584 aa6.99□□□□□ -1.29
SNORA40.16-201ENST00000517238 AEBP2Q6ZN18 517 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.16-201ENST00000517238 CHIC1Q5VXU3 224 aa6.14□□□□□ -1.43
SNORA40.16-201ENST00000517238 SENP3Q9H4L4 574 aaPredicted RBP5.77□□□□□ -1.49
SNORA40.16-201ENST00000517238 PHF23Q9BUL5 403 aaPredicted RBP5.54□□□□□ -1.52
SNORA40.16-201ENST00000517238 MSH5O43196 834 aa5.52□□□□□ -1.53
SNORA40.16-201ENST00000517238 FOXD1Q16676 465 aa5.46□□□□□ -1.54
SNORA40.16-201ENST00000517238 CACNB1Q02641 598 aaPredicted RBP5.35□□□□□ -1.55
SNORA40.16-201ENST00000517238 POTEHQ6S545 545 aa5.31□□□□□ -1.56
SNORA40.16-201ENST00000517238 PIAS4Q8N2W9 510 aaPredicted RBP4.94□□□□□ -1.62
SNORA40.16-201ENST00000517238 PLSCR2Q9NRY7 297 aa4.86□□□□□ -1.63
SNORA40.16-201ENST00000517238 RNF39Q9H2S5 420 aa4.59□□□□□ -1.67
SNORA40.16-201ENST00000517238 SP7Q8TDD2 431 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.16-201ENST00000517238 C1QBPQ07021 282 aaKnown RBP4.48□□□□□ -1.69
SNORA40.16-201ENST00000517238 DMRT2Q9Y5R5 561 aa4.4□□□□□ -1.71
SNORA40.16-201ENST00000517238 DCAF8L1A6NGE4 600 aa4.38□□□□□ -1.71
SNORA40.16-201ENST00000517238 PPP6R1Q9UPN7 881 aa4.37□□□□□ -1.71
SNORA40.16-201ENST00000517238 ADRA2BP18089 450 aa4.32□□□□□ -1.72
SNORA40.16-201ENST00000517238 MAPK8IP2Q13387 824 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.16-201ENST00000517238 LHX8Q68G74 356 aa4.24□□□□□ -1.73
SNORA40.16-201ENST00000517238 CHRDL2Q6WN34 429 aa4.15□□□□□ -1.75
SNORA40.16-201ENST00000517238 POTEMA6NI47 508 aa4.07□□□□□ -1.76
SNORA40.16-201ENST00000517238 HAX1O00165 279 aa4.07□□□□□ -1.76
SNORA40.16-201ENST00000517238 POTEGQ6S5H5 508 aa4.01□□□□□ -1.77
SNORA40.16-201ENST00000517238 PCDH10Q9P2E7 1040 aa4.01□□□□□ -1.77
SNORA40.16-201ENST00000517238 SCAF1Q9H7N4 1312 aaKnown RBP3.98□□□□□ -1.77
SNORA40.16-201ENST00000517238 DSG3P32926 999 aa3.98□□□□□ -1.77
SNORA40.16-201ENST00000517238 EVX2Q03828 476 aa3.88□□□□□ -1.79
SNORA40.16-201ENST00000517238 RBM42Q9BTD8 480 aaKnown RBP3.87□□□□□ -1.79
SNORA40.16-201ENST00000517238 DNAJC5BQ9UF47 199 aa3.87□□□□□ -1.79
SNORA40.16-201ENST00000517238 CAPN15O75808 1086 aa3.84□□□□□ -1.79
SNORA40.16-201ENST00000517238 HOXD11P31277 338 aaPredicted RBP3.84□□□□□ -1.79
SNORA40.16-201ENST00000517238 PIP4P2Q8N4L2 257 aa3.83□□□□□ -1.8
SNORA40.16-201ENST00000517238 PLPPR3Q6T4P5 718 aa3.82□□□□□ -1.8
SNORA40.16-201ENST00000517238 SPINK5Q9NQ38 1064 aaPredicted RBP3.76□□□□□ -1.81
SNORA40.16-201ENST00000517238 GABBR2O75899 941 aa3.75□□□□□ -1.81
SNORA40.16-201ENST00000517238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.74□□□□□ -1.81
SNORA40.16-201ENST00000517238 OTUD5Q96G74 571 aa3.7□□□□□ -1.82
SNORA40.16-201ENST00000517238 ABCB7O75027 752 aa3.67□□□□□ -1.82
SNORA40.16-201ENST00000517238 POTEIP0CG38 1075 aa3.64□□□□□ -1.83
SNORA40.16-201ENST00000517238 MMRN1Q13201 1228 aa3.64□□□□□ -1.83
SNORA40.16-201ENST00000517238 CDAN1Q8IWY9 1227 aa3.63□□□□□ -1.83
SNORA40.16-201ENST00000517238 FXR2P51116 673 aaKnown RBP eCLIP3.62□□□□□ -1.83
SNORA40.16-201ENST00000517238 LCE2DQ5TA82 110 aaPredicted RBP3.58□□□□□ -1.84
SNORA40.16-201ENST00000517238 FAM163AQ96GL9 167 aaPredicted RBP3.58□□□□□ -1.84
SNORA40.16-201ENST00000517238 RNF216Q9NWF9 866 aaPredicted RBP3.58□□□□□ -1.84
SNORA40.16-201ENST00000517238 C19orf67A6NJJ6 358 aa3.55□□□□□ -1.84
SNORA40.16-201ENST00000517238 TRHP20396 242 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.16-201ENST00000517238 SPNS2Q8IVW8 549 aa3.54□□□□□ -1.84
SNORA40.16-201ENST00000517238 AKT1S1Q96B36 256 aa3.54□□□□□ -1.84
SNORA40.16-201ENST00000517238 POTEB2H3BUK9 544 aa3.51□□□□□ -1.85
SNORA40.16-201ENST00000517238 REM2Q8IYK8 340 aaPredicted RBP3.51□□□□□ -1.85
SNORA40.16-201ENST00000517238 DCBLD2Q96PD2 775 aa3.51□□□□□ -1.85
SNORA40.16-201ENST00000517238 PITPNM1O00562 1244 aa3.5□□□□□ -1.85
SNORA40.16-201ENST00000517238 U3KPZ7 1027 aaPredicted RBP3.5□□□□□ -1.85
SNORA40.16-201ENST00000517238 ZNF219Q9P2Y4 722 aaPredicted RBP3.48□□□□□ -1.85
SNORA40.16-201ENST00000517238 PRKAR2AP13861 404 aaKnown RBP3.42□□□□□ -1.86
SNORA40.16-201ENST00000517238 CNKSR2Q8WXI2 1034 aa3.38□□□□□ -1.87
SNORA40.16-201ENST00000517238 MAMSTRQ6ZN01 415 aa3.36□□□□□ -1.87
SNORA40.16-201ENST00000517238 CLCN6P51797 869 aa3.35□□□□□ -1.87
SNORA40.16-201ENST00000517238 APLP2Q06481 763 aa3.35□□□□□ -1.87
SNORA40.16-201ENST00000517238 SCUBE2Q9NQ36 999 aa3.31□□□□□ -1.88
SNORA40.16-201ENST00000517238 POTEJP0CG39 1038 aa3.28□□□□□ -1.88
SNORA40.16-201ENST00000517238 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
SNORA40.16-201ENST00000517238 CD44P16070 742 aaKnown RBP3.26□□□□□ -1.89
SNORA40.16-201ENST00000517238 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
SNORA40.16-201ENST00000517238 ST18O60284 1047 aa3.22□□□□□ -1.89
SNORA40.16-201ENST00000517238 PPP4R3CPQ6ZMV5 832 aa3.22□□□□□ -1.89
SNORA40.16-201ENST00000517238 POLA2Q14181 598 aa3.21□□□□□ -1.9
SNORA40.16-201ENST00000517238 METRNQ9UJH8 293 aa3.21□□□□□ -1.9
SNORA40.16-201ENST00000517238 GALR2O43603 387 aaPredicted RBP3.18□□□□□ -1.9
SNORA40.16-201ENST00000517238 CHADLQ6NUI6 762 aa3.17□□□□□ -1.9
SNORA40.16-201ENST00000517238 PELP1Q8IZL8 1130 aaKnown RBP3.17□□□□□ -1.9
SNORA40.16-201ENST00000517238 CLEC11AQ9Y240 323 aa3.17□□□□□ -1.9
SNORA40.16-201ENST00000517238 OSCARQ8IYS5 282 aa3.16□□□□□ -1.9
SNORA40.16-201ENST00000517238 RNF166Q96A37 237 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.16-201ENST00000517238 C7P10643 843 aa3.14□□□□□ -1.91
SNORA40.16-201ENST00000517238 ZNF579Q8NAF0 562 aaKnown RBP3.13□□□□□ -1.91
SNORA40.16-201ENST00000517238 SLC39A7Q92504 469 aa3.13□□□□□ -1.91
SNORA40.16-201ENST00000517238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.11□□□□□ -1.91
SNORA40.16-201ENST00000517238 HNRNPUL2Q1KMD3 747 aaKnown RBP3.11□□□□□ -1.91
SNORA40.16-201ENST00000517238 TMEM121BQ9BXQ6 578 aaPredicted RBP3.11□□□□□ -1.91
SNORA40.16-201ENST00000517238 KRTAP3-3Q9BYR6 98 aa3.11□□□□□ -1.91
SNORA40.16-201ENST00000517238 KRTAP3-2Q9BYR7 98 aa3.11□□□□□ -1.91
SNORA40.16-201ENST00000517238 MARVELD3Q96A59 401 aa3.1□□□□□ -1.91
SNORA40.16-201ENST00000517238 SPDYE1Q8NFV5 336 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.16-201ENST00000517238 ZRANB1Q9UGI0 708 aa3.07□□□□□ -1.92
SNORA40.16-201ENST00000517238 ZBTB12Q9Y330 459 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.16-201ENST00000517238 IRX2Q9BZI1 471 aaPredicted RBP3.06□□□□□ -1.92
SNORA40.16-201ENST00000517238 SAMD1Q6SPF0 538 aaPredicted RBP3.04□□□□□ -1.92
SNORA40.16-201ENST00000517238 SLAIN1Q8ND83 568 aa3.03□□□□□ -1.92
SNORA40.16-201ENST00000517238 MYT1LQ9UL68 1186 aa3.03□□□□□ -1.92
SNORA40.16-201ENST00000517238 PLA2G2EQ9NZK7 142 aa3.02□□□□□ -1.93
SNORA40.16-201ENST00000517238 EMP3P54852 163 aa3.01□□□□□ -1.93
SNORA40.16-201ENST00000517238 ASTLQ6HA08 431 aaPredicted RBP3.01□□□□□ -1.93
SNORA40.16-201ENST00000517238 FARP1Q9Y4F1 1045 aaPredicted RBP3.01□□□□□ -1.93
SNORA40.16-201ENST00000517238 ATMINO43313 823 aaPredicted RBP2.99□□□□□ -1.93
SNORA40.16-201ENST00000517238 HS3ST6Q96QI5 342 aa2.99□□□□□ -1.93
SNORA40.16-201ENST00000517238 ATF5Q9Y2D1 282 aaPredicted RBP2.97□□□□□ -1.93
SNORA40.16-201ENST00000517238 FAM205CA6NFA0 338 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms