Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
SPCS1Q9Y6A9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 FLJ16779-201ENST00000612722 7638 ntBASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 AL365209.1-201ENST00000624418 6473 ntBASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPCS1Q9Y6A9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 AC093525.10-201ENST00000625130 1569 ntBASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 RP9P-202ENST00000450133 1212 ntBASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 AC126755.1-201ENST00000525846 6405 ntBASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 HYMAI-201ENST00000635591 3347 ntBASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.16□□□□□ -0.3
SPCS1Q9Y6A9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SPCS1Q9Y6A9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms