Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 AL023973.1-201ENST00000624619 620 ntBASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 AC112907.3-201ENST00000577781 2400 ntBASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.82■□□□□ 0.6
HS3ST3A1Q9Y663 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 AC091076.1-201ENST00000610741 619 ntBASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 AC008622.2-201ENST00000617006 1229 ntBASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
HS3ST3A1Q9Y663 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HS3ST3A1Q9Y663 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 AC009947.2-201ENST00000444014 672 ntBASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HS3ST3A1Q9Y663 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.78■□□□□ 0.6
HS3ST3A1Q9Y663 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms